Parental gene:

CNIH4, ENSCJAG00000008013

Aliases:None
Description:cornichon homolog 4 (Drosophila) [Source:HGNC Symbol;Acc:25013]
Organism:Marmoset (Callithrix jacchus)
Coordinates:19:630651..659773(-)


>ENSCJAG00000008013
ATGGAGGCGGTGGTGTTTGTCTTTTCTCTCCTTGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCATAATTACGTT
GTCTGATTTAGAATGTGATTACATTAACGCTAGATCATGTTGCTCAAAATTAAACAAGTGGGTAATTCCAGAATTGATTG
GCCATACCGTTGTCACTGTATTAATGCTCATTTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGG
AATATATATCGATACATTATGGTGCCAAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAACCGAGGGCAGCT
GAAGTCACACATGAAAGAAGCCATGATCAAACTTGGTTTCCACTTGCTCTGTTTCTTCATGTATCTTTACAGTATGATCT
TAGCTTTGATAAATGACTGA

Library Parental gene expression (RPM)
SRP051959_spleen 4 .56 RPM
SRP051959_skeletal_muscle 3 .25 RPM
SRP051959_lymph_node 4 .66 RPM
SRP051959_lung 5 .06 RPM
SRP051959_liver 3 .27 RPM
SRP051959_kidney 11 .96 RPM
SRP051959_heart 3 .60 RPM
SRP051959_colon 3 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006544 ortholog_one2one 1 retrogene
retro_chof_327,
Callithrix jacchus ENSCJAG00000007306 within_species_paralog 1 retrogene
retro_cjac_103,
Cavia porcellus ENSCPOG00000007310 ortholog_one2one 1 retrogene
retro_cpor_777,
Dasypus novemcinctus ENSDNOG00000007093 ortholog_one2one 1 retrogene
retro_dnov_1669,
Homo sapiens ENSG00000143771 ortholog_one2one 1 retrogene
retro_hsap_3656,
Gorilla gorilla ENSGGOG00000005708 ortholog_one2one 1 retrogene
retro_ggor_2470,
Myotis lucifugus ENSMLUG00000003134 ortholog_one2one 1 retrogene
retro_mluc_1314,
Macaca mulatta ENSMMUG00000009936 ortholog_one2one 1 retrogene
retro_mmul_1796,
Nomascus leucogenys ENSNLEG00000013549 ortholog_one2one 1 retrogene
retro_nleu_514,
Ochotona princeps ENSOPRG00000001589 ortholog_one2one 1 retrogene
retro_opri_749,
Pongo abelii ENSPPYG00000000183 ortholog_one2one 1 retrogene
retro_pabe_3003,
Pan troglodytes ENSPTRG00000002025 ortholog_one2one 1 retrogene
retro_ptro_2481,
Pteropus vampyrus ENSPVAG00000014034 ortholog_one2one 1 retrogene
retro_pvam_692,
Ictidomys tridecemlineatus ENSSTOG00000027396 ortholog_one2one 2 retrogenes
retro_itri_1502, retro_itri_1552,
Vicugna pacos ENSVPAG00000012521 ortholog_one2one 2 retrogenes
retro_vpac_180, retro_vpac_215,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2474 75.44 80.58
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Download FASTA sequences of all ENSCJAG00000008013 retrocopies