Parental gene:

CNIH4, ENSPPYG00000000183

Aliases:None
Description:protein cornichon homolog 4 [Source:RefSeq peptide;Acc:NP_001125902]
Organism:Orangutan (Pongo abelii)
Coordinates:1:25358962..25381794(-)


>ENSPPYG00000000183
ATGGAGGCGGTGGTGTTCGTCTTCTCTCTCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCATAATTACATT
GTCTGATTTAGAATGTGATTACATTAACGCTAGATCATGTTGCTCAAAATTAAACAAGTGGGTAATTCCAGAATTGATTG
GCCATACCATTGTCACTGTATTACTGCTCATTTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGG
AATATATATCGATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCT
GAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGATCT
TAGCTTTGATAAATGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .19 RPM
SRP007412_cerebellum 22 .01 RPM
SRP007412_heart 12 .94 RPM
SRP007412_kidney 21 .11 RPM
SRP007412_liver 16 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006544 ortholog_one2one 1 retrogene
retro_chof_327,
Callithrix jacchus ENSCJAG00000008013 ortholog_one2one 1 retrogene
retro_cjac_2474,
Cavia porcellus ENSCPOG00000007310 ortholog_one2one 1 retrogene
retro_cpor_777,
Dasypus novemcinctus ENSDNOG00000007093 ortholog_one2one 1 retrogene
retro_dnov_1669,
Homo sapiens ENSG00000143771 ortholog_one2one 1 retrogene
retro_hsap_3656,
Gorilla gorilla ENSGGOG00000005708 ortholog_one2one 1 retrogene
retro_ggor_2470,
Myotis lucifugus ENSMLUG00000003134 ortholog_one2one 1 retrogene
retro_mluc_1314,
Macaca mulatta ENSMMUG00000009936 ortholog_one2one 1 retrogene
retro_mmul_1796,
Nomascus leucogenys ENSNLEG00000013549 ortholog_one2one 1 retrogene
retro_nleu_514,
Ochotona princeps ENSOPRG00000001589 ortholog_one2one 1 retrogene
retro_opri_749,
Pan troglodytes ENSPTRG00000002025 ortholog_one2one 1 retrogene
retro_ptro_2481,
Pteropus vampyrus ENSPVAG00000014034 ortholog_one2one 1 retrogene
retro_pvam_692,
Ictidomys tridecemlineatus ENSSTOG00000027396 ortholog_one2one 2 retrogenes
retro_itri_1502, retro_itri_1552,
Vicugna pacos ENSVPAG00000012521 ortholog_one2one 2 retrogenes
retro_vpac_180, retro_vpac_215,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3003 78.76 80.58
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Download FASTA sequences of all ENSPPYG00000000183 retrocopies