Parental gene:

TAGLN, ENSCJAG00000012755

Aliases:LOC100385619, TAGLN, transgelin
Description:transgelin [Source:HGNC Symbol;Acc:11553]
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:14785195..14790971(+)


>ENSCJAG00000012755
ATGGCCAACAAGGGTCCTTCCTATGGCATGAGCCGAGAAGTGCAGTCCAAAATCGAGAAGAAATACGATGAGGAGCTGGA
GGAGCGGCTGGTGGAATGGATTATAGTGCAGTGTGGCCCTGATGTGGGCCGCCCAGACCGTGGGCGCCTGGGCTTCCAGG
TCTGGCTGAAGAACGGCGTGATTCTGAGCAAGCTGGTGAATAGCCTGTACCCTGATGGCTCCAAGCCAGTGAAGGTGCCT
GAGAACCCGCCCTCCATGGTCTTCAAGCAGATGGAGCAGGTGGCCCAGTTCCTGAAGGCAGCTGAGGACTATGGGGTCAC
CAAGACTGACATGTTCCAGACTGTTGACCTCTTTGAAGGCAAAGACATGGCAGCAGTGCAGAGGACCCTGATGGCTTTGG
GCAGCTTGGCAGTGACCAAGAATGATGGGCACTACCGTGGAGATCCCAACTGGTTTATGAAGAAAGCGCAGGAGCATAAG
AGAGAATTCACAGAGAGCCAGCTGCAGGAGGGAAAGCATGTCATTGGCCTTCAGATGGGCAGCAACAGAGGGGCCTCCCA
GGCCGGCATGACGGGCTACGGACGACCTCGGCAGATCATCAGTTAG

Library Parental gene expression (RPM)
SRP051959_colon 207 .63 RPM
SRP051959_heart 344 .51 RPM
SRP051959_kidney 30 .53 RPM
SRP051959_liver 5 .65 RPM
SRP051959_lung 44 .44 RPM
SRP051959_lymph_node 22 .15 RPM
SRP051959_skeletal_muscle 24 .79 RPM
SRP051959_spleen 29 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005530 within_species_paralog 1 retrogene
retro_cjac_681,
Callithrix jacchus ENSCJAG00000006156 within_species_paralog 2 retrogenes
retro_cjac_2035, retro_cjac_2444,
Callithrix jacchus ENSCJAG00000018128 within_species_paralog 3 retrogenes
retro_cjac_1331, retro_cjac_533, retro_cjac_861,
Microcebus murinus ENSMICG00000002371 ortholog_one2one 1 retrogene
retro_mmur_666,
Oryctolagus cuniculus ENSOCUG00000011970 ortholog_one2many 1 retrogene
retro_ocun_116,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_723 87.00 99.50
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2. retro_cjac_778 95.52 100.00
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Download FASTA sequences of all ENSCJAG00000012755 retrocopies