Parental gene:

ENSCJAG00000015775

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:22832378..22912164(-)


>ENSCJAG00000015775
ATGGCGCGTCCGCGGCCTCGCGAGTACAAAGCGGGCGACCTGGTCTTCGCCAAGATGAAGGGCTACCCGCACTGGCCCGC
CCGGATTGATGAACTCCCAGAGGGAGCTGTGAAGCCTCCAGCAAACAAGTATCCTATCTTCTTTTTTGGCACCCATGAAA
CTGCATTTCTAGGTCCCAAAGACCTTTTTCCATATAAAGAGTACAAAGACAAGTTTGGAAAGTCAAATAAACGGAAAGGA
TTTAACGAAGGATTGTGGGAAATAGAAAATAACCCAGGAGTAAAGTTTACTGGATACCAGGCAATTCAGCAACAGAGCTC
TTCAGAAACTGAGGGAGAAGGTGGAAATACTGCAGATGCAAGCAGTGAGGAAGAAGGTGATAGAGTAGAAGAAGATGGAA
AAGGCAAAAGAAAGAATGAAAAAGCAGGCTCAAAACGGAAAAAGTCATATACTTCAAAGAAATCCTCTAAACAGTCCCGG
AAATCTCCAGGAGATGAAGATGACAAAGACTGCAAAGAAGAGGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCGGGCAA
TGACACAAGAAACACAACTTCAGACTTGCAGAAAACCAGTGAAGGGACCTAA

Library Parental gene expression (RPM)
SRP051959_spleen 6 .74 RPM
SRP051959_skeletal_muscle 3 .14 RPM
SRP051959_lymph_node 2 .97 RPM
SRP051959_lung 12 .79 RPM
SRP051959_liver 1 .34 RPM
SRP051959_kidney 5 .13 RPM
SRP051959_heart 20 .70 RPM
SRP051959_colon 5 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018527 ortholog_one2one 1 retrogene
retro_btau_1740,
Callithrix jacchus ENSCJAG00000006157 within_species_paralog 2 retrogenes
retro_cjac_338, retro_cjac_4022,
Callithrix jacchus ENSCJAG00000012471 within_species_paralog 1 retrogene
retro_cjac_4069,
Dasypus novemcinctus ENSDNOG00000003696 ortholog_one2one 2 retrogenes
retro_dnov_619, retro_dnov_819,
Echinops telfairi ENSETEG00000010466 ortholog_one2one 1 retrogene
retro_etel_1234,
Loxodonta africana ENSLAFG00000002512 ortholog_one2one 1 retrogene
retro_lafr_676,
Ictidomys tridecemlineatus ENSSTOG00000028389 ortholog_one2one 2 retrogenes
retro_itri_292, retro_itri_864,
Tursiops truncatus ENSTTRG00000004950 ortholog_one2one 1 retrogene
retro_ttru_1471,
Vicugna pacos ENSVPAG00000004599 ortholog_one2one 1 retrogene
retro_vpac_380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4165 63.03 58.13
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Download FASTA sequences of all ENSCJAG00000015775 retrocopies