Parental gene: | ENSDNOG00000003696 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3270:37660..96745(-) |
>ENSDNOG00000003696
ATGGCGCGTCCGCGGCCCCGCGAGTACAAGGCGGGCGACCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNATTGATGAACTCCCAGAAGGAGCCGTGAAACCTCCAGCAAATAAGTATCCTATCTTCTTTTTTGGCACCCATGAAA
CTGCATTTCTAGGTCCCAAAGACCTTTTCCCATATAAGGAATATAAAGACAAGTTTGGAAAGTCAAACAAACGGAAAGGA
TTTAATGAAGGGTTATGGGAAATAGAAAATAACCCAGGAGTGAAGTTTACTGGATACCAGGCAATTCAGCAACAGAGCTC
TTCAGAAACTGAGGGAGAAGGCGGAAATACTGCAGATGCAAGCAGTGAGGAAGAAGGTGATAGAGTAGAAGAAGACGGAA
AAGGCAAAAGAAAGAATGAAAAAGCAGGCTCAAAACGGAAAAAATCATACACTTCCAAGAAATCCTCTAAACAGTTCCGG
AAATCTCCAGGAGATGAAGATGACAAGGATTGCAAAGAAGAAGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCTGGCAA
TGACACAAGAAACACAACTTCAGACTTGCAGAAAACGAGTGAAGGGACCTAA
ATGGCGCGTCCGCGGCCCCGCGAGTACAAGGCGGGCGACCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNATTGATGAACTCCCAGAAGGAGCCGTGAAACCTCCAGCAAATAAGTATCCTATCTTCTTTTTTGGCACCCATGAAA
CTGCATTTCTAGGTCCCAAAGACCTTTTCCCATATAAGGAATATAAAGACAAGTTTGGAAAGTCAAACAAACGGAAAGGA
TTTAATGAAGGGTTATGGGAAATAGAAAATAACCCAGGAGTGAAGTTTACTGGATACCAGGCAATTCAGCAACAGAGCTC
TTCAGAAACTGAGGGAGAAGGCGGAAATACTGCAGATGCAAGCAGTGAGGAAGAAGGTGATAGAGTAGAAGAAGACGGAA
AAGGCAAAAGAAAGAATGAAAAAGCAGGCTCAAAACGGAAAAAATCATACACTTCCAAGAAATCCTCTAAACAGTTCCGG
AAATCTCCAGGAGATGAAGATGACAAGGATTGCAAAGAAGAAGAAAACAAAAGCAGCTCTGAGGGTGGAGATGCTGGCAA
TGACACAAGAAACACAACTTCAGACTTGCAGAAAACGAGTGAAGGGACCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 31 .11 RPM |
| SRP012922_cerebellum | 60 .35 RPM |
| SRP012922_heart | 29 .24 RPM |
| SRP012922_kidney | 49 .56 RPM |
| SRP012922_liver | 4 .33 RPM |
| SRP012922_lung | 53 .61 RPM |
| SRP012922_quadricep_muscle | 14 .54 RPM |
| SRP012922_spleen | 38 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018527 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015775 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010231 | within_species_paralog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000010466 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000002512 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000028389 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004950 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000004599 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_619 | 84.55 | 60.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_819 | 75.73 | 50.25 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000003696 retrocopies