Parental gene:

NDUFS6, ENSCJAG00000019382

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:2:202771804..202789359(-)


>ENSCJAG00000019382
ATGGCGGCAACGGTGACCTTCTGCCGGCTGTTGTGCCGGTCCGGCGCGGCTGCGCGGAGCCTGTCCCTGGGCGCCAGGTG
TTTCGGGGTGCAGATTTCGCCGACCGGGGAGAAGATCACACACACTGGCCAGGTTTATGATGAAAAAGACTACAGGAGAC
TCCGGTTTGTAGGTCGTCAGAAAGAGGTGAATGAAAACTTTGGCATTGATTTGATAGCAGAGCAGCCGGTGAGCGAGGTG
GAGGCTCGGGTGATCTCGTGCGATGGCGGCGGGGGTGCGCTGGGCCACCCGAAAGTGTACATCAACTTGGACAAAGAGAC
AAAAACGGGCACATGTGGTTACTGTGGGCTGCAGTTCAGACAGCACCACCGCTAG

Library Parental gene expression (RPM)
SRP051959_spleen 5 .88 RPM
SRP051959_skeletal_muscle 21 .82 RPM
SRP051959_lymph_node 6 .60 RPM
SRP051959_lung 6 .39 RPM
SRP051959_liver 12 .02 RPM
SRP051959_kidney 16 .88 RPM
SRP051959_heart 19 .73 RPM
SRP051959_colon 9 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010930 ortholog_one2one 2 retrogenes
retro_amel_213, retro_amel_228,
Bos taurus ENSBTAG00000009914 ortholog_one2one 2 retrogenes
retro_btau_302, retro_btau_333,
Equus caballus ENSECAG00000021690 ortholog_one2one 3 retrogenes
retro_ecab_701, retro_ecab_838, retro_ecab_917,
Homo sapiens ENSG00000145494 ortholog_one2one 1 retrogene
retro_hsap_2838,
Latimeria chalumnae ENSLACG00000004625 ortholog_one2one 1 retrogene
retro_lcha_95,
Loxodonta africana ENSLAFG00000005708 ortholog_one2many 1 retrogene
retro_lafr_5,
Myotis lucifugus ENSMLUG00000016888 ortholog_one2one 1 retrogene
retro_mluc_1750,
Macaca mulatta ENSMMUG00000004447 ortholog_one2one 1 retrogene
retro_mmul_1473,
Monodelphis domestica ENSMODG00000001425 ortholog_one2many 1 retrogene
retro_mdom_207,
Mus musculus ENSMUSG00000021606 ortholog_one2one 1 retrogene
retro_mmus_3044,
Nomascus leucogenys ENSNLEG00000011199 ortholog_one2one 1 retrogene
retro_nleu_1593,
Oryctolagus cuniculus ENSOCUG00000004581 ortholog_one2one 2 retrogenes
retro_ocun_1011, retro_ocun_1624,
Pongo abelii ENSPPYG00000015323 ortholog_one2one 1 retrogene
retro_pabe_2350,
Pan troglodytes ENSPTRG00000016706 ortholog_one2one 1 retrogene
retro_ptro_1924,
Rattus norvegicus ENSRNOG00000023387 ortholog_one2many 1 retrogene
retro_rnor_1619,
Rattus norvegicus ENSRNOG00000049394 ortholog_one2many 1 retrogene
retro_rnor_1618,
Sarcophilus harrisii ENSSHAG00000017779 ortholog_one2one 1 retrogene
retro_shar_176,
Ictidomys tridecemlineatus ENSSTOG00000003715 ortholog_one2one 1 retrogene
retro_itri_496,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1552 51.69 93.55
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Download FASTA sequences of all ENSCJAG00000019382 retrocopies