Parental gene:

UQCRB, ENSCJAG00000020560

Aliases:None
Description:ubiquinol-cytochrome c reductase binding protein [Source:HGNC Symbol;Acc:12582]
Organism:Marmoset (Callithrix jacchus)
Coordinates:16:48040229..48045256(-)


>ENSCJAG00000020560
GTTTCAGCATCAAGCAGGTTGCTGGAGATTATGCGAAAATGGTATTACAATGCTGCAGGATTCAATAAACTGGGGTTACT
GCGAGATGACACAATATATGAGGATGAAGATGTAAAGGAAGCCATAAGAAGGCTTCCTGAGAACCTTTATAATGACAGGA
TGTTTCGCATTAAGAGGGCACTGGACCTGTCCATGAAGCATCAGATCCTGCCTAAAGAGCAGTGGACCAAATACGAAGAG
GACATTGTTGTTCTACCTCTGCACTCTGTTTCCTACTTAGATGAAAAGATCAGCCCATTGAGGTGCCCTCTAGATCCCAT
AAAGAGCTTCTGTGAAGCAAACCCTTACCCCTTGAACTGCATTGAAACGAGGCAAAGGCCTGTAGACACACATTTCTTTT
TCTTCCCGAAAAGACTTCCCTCTCATAACCTAGCAAAGCAGCTTACCACAGTATCACCACAGATTTGA

Library Parental gene expression (RPM)
SRP051959_spleen 11 .70 RPM
SRP051959_skeletal_muscle 50 .12 RPM
SRP051959_lymph_node 11 .37 RPM
SRP051959_lung 11 .31 RPM
SRP051959_liver 26 .04 RPM
SRP051959_kidney 32 .17 RPM
SRP051959_heart 61 .04 RPM
SRP051959_colon 19 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007287 ortholog_one2one 1 retrogene
retro_amel_985,
Canis familiaris ENSCAFG00000009449 ortholog_one2one 4 retrogenes
retro_cfam_1504, retro_cfam_1509, retro_cfam_1531, retro_cfam_792,
Cavia porcellus ENSCPOG00000012149 ortholog_one2one 2 retrogenes
retro_cpor_1086, retro_cpor_866,
Erinaceus europaeus ENSEEUG00000001312 ortholog_one2one 1 retrogene
retro_eeur_224,
Felis catus ENSFCAG00000026302 ortholog_one2one 5 retrogenes
retro_fcat_1292, retro_fcat_178, retro_fcat_1780, retro_fcat_378, retro_fcat_558,
Homo sapiens ENSG00000156467 ortholog_one2one 2 retrogenes
retro_hsap_3261, retro_hsap_4838,
Gorilla gorilla ENSGGOG00000026528 ortholog_one2one 1 retrogene
retro_ggor_3017,
Latimeria chalumnae ENSLACG00000004465 ortholog_one2one 1 retrogene
retro_lcha_127,
Loxodonta africana ENSLAFG00000002542 ortholog_one2one 1 retrogene
retro_lafr_727,
Myotis lucifugus ENSMLUG00000007182 ortholog_one2one 1 retrogene
retro_mluc_1601,
Macaca mulatta ENSMMUG00000008804 ortholog_one2one 3 retrogenes
retro_mmul_2053, retro_mmul_2065, retro_mmul_2581,
Mus musculus ENSMUSG00000021520 ortholog_one2one 4 retrogenes
retro_mmus_1175, retro_mmus_1628, retro_mmus_2610, retro_mmus_514,
Nomascus leucogenys ENSNLEG00000026670 ortholog_one2many 1 retrogene
retro_nleu_1357,
Oryctolagus cuniculus ENSOCUG00000008113 ortholog_one2one 3 retrogenes
retro_ocun_1149, retro_ocun_345, retro_ocun_570,
Otolemur garnettii ENSOGAG00000004302 ortholog_one2one 1 retrogene
retro_ogar_1451,
Ochotona princeps ENSOPRG00000008892 ortholog_one2one 2 retrogenes
retro_opri_109, retro_opri_688,
Pongo abelii ENSPPYG00000018763 ortholog_one2one 2 retrogenes
retro_pabe_2703, retro_pabe_3762,
Rattus norvegicus ENSRNOG00000024967 ortholog_one2many 1 retrogene
retro_rnor_290,
Sorex araneus ENSSARG00000002999 ortholog_one2one 3 retrogenes
retro_sara_460, retro_sara_52, retro_sara_704,
Ictidomys tridecemlineatus ENSSTOG00000008017 ortholog_one2many 1 retrogene
retro_itri_46,
Tarsius syrichta ENSTSYG00000010502 ortholog_one2one 2 retrogenes
retro_tsyr_1114, retro_tsyr_898,
Drosophila melanogaster FBgn0030733 ortholog_one2many 1 retrogene
retro_dmel_22,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_894 88.39 100.00
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2. retro_cjac_2206 55.45 88.29
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Download FASTA sequences of all ENSCJAG00000020560 retrocopies