Parental gene:

HINT2, ENSCPOG00000000419

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_27:16158093..16159985(-)


>ENSCPOG00000000419
ATGGCTGCGGCAATGGTGCTGGCCGCCAGGTTCCGCGCGGTGCACAGAGCCCTTGCAGCCGCGGGGGCGCGAAGGTTGCA
GGTCCGAGGAGCTGCAGGTATGACTGACGGGAATGAAGTGGCCAAGGCCCAGCAGGCAGCTCCTGGAGGAGCATCCCCAA
CAATCTTCTCTCGTATCCTGGACAGAAGCCTCCCAGCTGACATTCTACATGAGGACCAGCAGTGTCTCGTGTTCCGTGAT
GTGGCCCCACAGGCTCCTGTGCATTTCCTGGTTATTCCTAAGAAGCCCATTCCTCGAATTAGCCAGGCTGAGGAAGAAGA
TCAGCAGCTTCTAGGACACCTCCTCCTTGTGGCCAAGAAGATAGCAAAGGCTGAGGGTCTGGGAGATGGGTACCGACTTG
TGATTAATGATGGAAAGCTGGGCGCACAATCTGTATATCACCTGCACATTCACGTGTTGGGAGGCCGACAGCTCCAGTGG
CCTCCAGGTTGA

Library Parental gene expression (RPM)
SRP017611_liver 49 .93 RPM
SRP017611_kidney 98 .51 RPM
SRP017611_brain 17 .14 RPM
SRP040447_lung 37 .68 RPM
SRP040447_skeletal_muscle 31 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011444 ortholog_one2one 1 retrogene
retro_btau_1129,
Callithrix jacchus ENSCJAG00000010068 ortholog_one2one 1 retrogene
retro_cjac_1343,
Dasypus novemcinctus ENSDNOG00000009083 ortholog_one2one 2 retrogenes
retro_dnov_201, retro_dnov_854,
Echinops telfairi ENSETEG00000017929 ortholog_one2one 1 retrogene
retro_etel_486,
Homo sapiens ENSG00000137133 ortholog_one2one 1 retrogene
retro_hsap_2603,
Gorilla gorilla ENSGGOG00000011265 ortholog_one2one 1 retrogene
retro_ggor_1823,
Loxodonta africana ENSLAFG00000015022 ortholog_one2one 1 retrogene
retro_lafr_737,
Macaca mulatta ENSMMUG00000016337 ortholog_one2one 1 retrogene
retro_mmul_1509,
Nomascus leucogenys ENSNLEG00000026914 ortholog_one2one 1 retrogene
retro_nleu_1534,
Oryctolagus cuniculus ENSOCUG00000027206 ortholog_one2many 1 retrogene
retro_ocun_66,
Otolemur garnettii ENSOGAG00000011830 ortholog_one2one 1 retrogene
retro_ogar_765,
Pongo abelii ENSPPYG00000019082 ortholog_one2one 1 retrogene
retro_pabe_2310,
Pan troglodytes ENSPTRG00000020923 ortholog_one2one 1 retrogene
retro_ptro_1754,
Pteropus vampyrus ENSPVAG00000003028 ortholog_one2one 1 retrogene
retro_pvam_842,
Tupaia belangeri ENSTBEG00000013020 ortholog_one2one 1 retrogene
retro_tbel_4676,
Tarsius syrichta ENSTSYG00000002700 ortholog_one2one 7 retrogenes
retro_tsyr_1210, retro_tsyr_1356, retro_tsyr_1483, retro_tsyr_1485, retro_tsyr_311, retro_tsyr_468, retro_tsyr_48,
Tursiops truncatus ENSTTRG00000011932 ortholog_one2one 1 retrogene
retro_ttru_1302,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_181 67.31 92.64
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Download FASTA sequences of all ENSCPOG00000000419 retrocopies