Parental gene:

HINT2, ENSPTRG00000020923

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:9:36248609..36250694(-)


>ENSPTRG00000020923
ATGGCGGCAGCCGTGGTGCTGGCTGCTGGGTTGCGCGCGGCGCGCAGAGCCGTGGCGGCCACGGGGGTGCGCGGGGGGCA
GGTCCGAGGAGCTGCAGGTGTGACTGATGGGAATGAAGTGGCCAAGGCCCAGCAGGCAACTCCTGGGGGAGCAGCCCCAA
CCATCTTCTCCCGGATCCTGGACAAGAGCCTCCCAGCTGACATTCTCTATGAGGACCAGCAGTGTCTTGTGTTCCGTGAT
GTGGCCCCTCAGGCTCCTGTGCACTTCCTGGTCATTCCTAAGAAGCCCATTCCTCGGATTAGCCAGGCTGAAGAAGAAGA
CCAGCAGCTTCTAGGACACCTACTCCTTGTGGCCAAGCAGACAGCAAAGGCTGAGGGCCTGGGAGATGGATACCGACTTG
TGATCAATGATGGGAAGCTGGGTGCACAATCTGTGTATCATCTGCACATTCATGTACTTGGGGGCCGGCAGCTCCAGTGG
CCTCCAGGTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .63 RPM
SRP007412_cerebellum 14 .84 RPM
SRP007412_heart 18 .39 RPM
SRP007412_kidney 71 .66 RPM
SRP007412_liver 67 .33 RPM
SRP007412_testis 7 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011444 ortholog_one2one 1 retrogene
retro_btau_1129,
Callithrix jacchus ENSCJAG00000010068 ortholog_one2one 1 retrogene
retro_cjac_1343,
Cavia porcellus ENSCPOG00000000419 ortholog_one2one 1 retrogene
retro_cpor_181,
Dasypus novemcinctus ENSDNOG00000009083 ortholog_one2one 2 retrogenes
retro_dnov_201, retro_dnov_854,
Echinops telfairi ENSETEG00000017929 ortholog_one2one 1 retrogene
retro_etel_486,
Homo sapiens ENSG00000137133 ortholog_one2one 1 retrogene
retro_hsap_2603,
Gorilla gorilla ENSGGOG00000011265 ortholog_one2one 1 retrogene
retro_ggor_1823,
Loxodonta africana ENSLAFG00000015022 ortholog_one2one 1 retrogene
retro_lafr_737,
Macaca mulatta ENSMMUG00000016337 ortholog_one2one 1 retrogene
retro_mmul_1509,
Nomascus leucogenys ENSNLEG00000026914 ortholog_one2one 1 retrogene
retro_nleu_1534,
Oryctolagus cuniculus ENSOCUG00000027206 ortholog_one2many 1 retrogene
retro_ocun_66,
Otolemur garnettii ENSOGAG00000011830 ortholog_one2one 1 retrogene
retro_ogar_765,
Pongo abelii ENSPPYG00000019082 ortholog_one2one 1 retrogene
retro_pabe_2310,
Pan troglodytes ENSPTRG00000017206 within_species_paralog 1 retrogene
retro_ptro_2661,
Pteropus vampyrus ENSPVAG00000003028 ortholog_one2one 1 retrogene
retro_pvam_842,
Tupaia belangeri ENSTBEG00000013020 ortholog_one2one 1 retrogene
retro_tbel_4676,
Tarsius syrichta ENSTSYG00000002700 ortholog_one2one 7 retrogenes
retro_tsyr_1210, retro_tsyr_1356, retro_tsyr_1483, retro_tsyr_1485, retro_tsyr_311, retro_tsyr_468, retro_tsyr_48,
Tursiops truncatus ENSTTRG00000011932 ortholog_one2one 1 retrogene
retro_ttru_1302,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1754 74.63 81.60
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Download FASTA sequences of all ENSPTRG00000020923 retrocopies