Parental gene:

TM2D1, ENSCPOG00000012287

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_2:69520744..69544729(+)


>ENSCPOG00000012287
TATATTTGTAAAGATCCAAAAATAAATGATGCTACACAAGAACCAGTTAACTGCACAAACTACACAGCTCATGTTCCATG
TCTCCCGGCACCCAATATAATATGTAAGGATTCTAGTGGCAACGAAACACATTTTACTGGAAAGGAAGTTGGTTTTTACA
AGGTTGTACCTTGCCGGAATGTAAACGGCTACTCGTACAAAGTAGCGGTTGCACTGTCCCTATTCCTCGGATGGCTGGGA
GCAGACCGGTTTTACCTTGGCTACCCTGCCCTGGGTTTATTAAAGTTTTGCACTGTAGGATTTTGTGGAATTGGGAGCCT
AATCGATTTTATTCTTATTTCAATGCAGATCGTTGGACCTTCAGATGGAAGTAGTTACATCATAGATTACTACGGAACCA
GGCTGATAAGACTGAGTATTACCAATGAAACATTTCGGAAAACACAGCTGTACCCA

Library Parental gene expression (RPM)
SRP017611_brain 10 .70 RPM
SRP017611_kidney 19 .58 RPM
SRP017611_liver 15 .84 RPM
SRP040447_lung 11 .88 RPM
SRP040447_skeletal_muscle 10 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011705 ortholog_one2one 1 retrogene
retro_amel_1290,
Canis familiaris ENSCAFG00000018838 ortholog_one2one 1 retrogene
retro_cfam_1213,
Choloepus hoffmanni ENSCHOG00000013535 ortholog_one2one 1 retrogene
retro_chof_1494,
Equus caballus ENSECAG00000015035 ortholog_one2one 1 retrogene
retro_ecab_556,
Erinaceus europaeus ENSEEUG00000001567 ortholog_one2one 1 retrogene
retro_eeur_708,
Loxodonta africana ENSLAFG00000013979 ortholog_one2one 1 retrogene
retro_lafr_662,
Mus musculus ENSMUSG00000028563 ortholog_one2one 2 retrogenes
retro_mmus_1412, retro_mmus_1981,
Rattus norvegicus ENSRNOG00000007527 ortholog_one2one 1 retrogene
retro_rnor_1104,
Tupaia belangeri ENSTBEG00000002089 ortholog_one2one 3 retrogenes
retro_tbel_1156, retro_tbel_1730, retro_tbel_201,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_471 54.95 58.55
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Download FASTA sequences of all ENSCPOG00000012287 retrocopies