Parental gene:

TM2D1, ENSECAG00000015035

Aliases:None
Description:TM2 domain containing 1 [Source:HGNC Symbol;Acc:24142]
Organism:Horse (Equus caballus)
Coordinates:5:98277770..98315689(+)


>ENSECAG00000015035
CTCGTGTCCGCCGCCGCAGGCGAGGACGCGCTCAAGTGCGAGGACCTCAGAGTGGGACAATATCTTTGTAAAGATCCAAA
AATAAATGATGCTACACAAGAGCCGGTGAACTGTACAAACTACACAGCTCATGTTCCATGTTTTCCAGCACCCAACATAA
CTTGTAAGGATTTTGGTGGCAATGAAACACATTTTACTGGACGTGAAGTTGGTTTTTTCAAGCCCATATCTTGCCGAAAT
GTAAATGGCTATTCATACAAGGTGGCGGTTGCACTGTCTCTCTTTCTTGGATGGTTGGGAGCAGATCGCTTTTACCTTGG
ATACCCTGCTTTGGGTTTGTTGAAGTTTTGCACTGTGGGCTTTTGTGGAATCGGGAGCCTAATTGATTTCATTCTTATTT
CAATGCAGATTGTTGGACCTTCAGATGGAAGTAGTTACATTATAGATTATTATGGAACCAGACTTACAAGACTGAGTATT
ACTAATGAGACGTTTAGAAAGACGCAGTTATATCCGTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 13 .10 RPM
SRP021940_cerebellum 19 .21 RPM
SRP021940_embryo 8 .77 RPM
SRP021940_placental_villous 18 .19 RPM
SRP021940_synovial_membrane 9 .91 RPM
SRP021940_testis 25 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011705 ortholog_one2one 1 retrogene
retro_amel_1290,
Canis familiaris ENSCAFG00000018838 ortholog_one2one 1 retrogene
retro_cfam_1213,
Choloepus hoffmanni ENSCHOG00000013535 ortholog_one2one 1 retrogene
retro_chof_1494,
Cavia porcellus ENSCPOG00000012287 ortholog_one2one 1 retrogene
retro_cpor_471,
Erinaceus europaeus ENSEEUG00000001567 ortholog_one2one 1 retrogene
retro_eeur_708,
Loxodonta africana ENSLAFG00000013979 ortholog_one2one 1 retrogene
retro_lafr_662,
Mus musculus ENSMUSG00000028563 ortholog_one2one 2 retrogenes
retro_mmus_1412, retro_mmus_1981,
Rattus norvegicus ENSRNOG00000007527 ortholog_one2one 1 retrogene
retro_rnor_1104,
Tupaia belangeri ENSTBEG00000002089 ortholog_one2one 3 retrogenes
retro_tbel_1156, retro_tbel_1730, retro_tbel_201,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_556 60.82 55.23
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Download FASTA sequences of all ENSECAG00000015035 retrocopies