Parental gene:

TM2D1, ENSEEUG00000001567

Aliases:None
Description:TM2 domain containing 1 [Source:HGNC Symbol;Acc:24142]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_5897:515..32097(-)


>ENSEEUG00000001567
GGCGAAGGCGGAACCGAAGAGGGGGAGAACCTGGTGGCCAGCATGGCGGCCTCCAGGCCCTTCGGCTCGGCTTCTGCGGA
GTCTGCGGCCGCCCAGCTCTTGGGTGTCCTGTGCATCGTATCCGTCACCGCGGGACCTTGGGCAGCTGCCGCCACCGCCG
GCGAAGAGACGCTTAAGTGCGAGGACCTTAAAGTGGGACAATATATTTGTAAAGGTCCGAAAATAAATGATGCCACCCAA
CCATTTAATTGTACGAACTACACAGCTCATGTTGCATGTCTTCCAGCACCCAATATAATTTGTAAGGATTATGGTGGTAA
TGAAACACACTTTACTGGAAAAGAAGTTGGTTTTTACAAGCCCATACCTTGCCGAAACGTAAATGGCTATTCATATAAAG
TAGCAGTTGCACTGTCCCTTTTTCTTGGATGGCTGGGAGCAGATCGATTTTACCTTGGATATCCTGCCTTGGGTCTGTTA
AAGTTTTGCACTGTAGGATTTTGTGGAATTGGAAGCCTTATTGATTTCATCCTTATTTCCATGCAGATTGTTGGACCTTC
AGATGGAAGTAGTTACATTATTGATTACTATGGAACCAGACTTATCAGACTAAGTATTACTAACGAGACATTTCGAAAAA
CACAGTTGTACCCATAA

Library Parental gene expression (RPM)
SRP017611_brain 16 .92 RPM
SRP017611_kidney 17 .25 RPM
SRP017611_liver 8 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011705 ortholog_one2one 1 retrogene
retro_amel_1290,
Canis familiaris ENSCAFG00000018838 ortholog_one2one 1 retrogene
retro_cfam_1213,
Choloepus hoffmanni ENSCHOG00000013535 ortholog_one2one 1 retrogene
retro_chof_1494,
Cavia porcellus ENSCPOG00000012287 ortholog_one2one 1 retrogene
retro_cpor_471,
Equus caballus ENSECAG00000015035 ortholog_one2one 1 retrogene
retro_ecab_556,
Loxodonta africana ENSLAFG00000013979 ortholog_one2one 1 retrogene
retro_lafr_662,
Mus musculus ENSMUSG00000028563 ortholog_one2one 2 retrogenes
retro_mmus_1412, retro_mmus_1981,
Rattus norvegicus ENSRNOG00000007527 ortholog_one2one 1 retrogene
retro_rnor_1104,
Tupaia belangeri ENSTBEG00000002089 ortholog_one2one 3 retrogenes
retro_tbel_1156, retro_tbel_1730, retro_tbel_201,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_708 88.55 59.17
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Download FASTA sequences of all ENSEEUG00000001567 retrocopies