Parental gene:

UBE2V2, ENSCPOG00000014413

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_64:9240662..9254088(-)


>ENSCPOG00000014413
ATGTTCTTTTGTATAGGAGTTAAAGTTCCTCGTAATTTTCGCTTGTTGGAAGAACTTGAAGAAGGACAAAAAGGAGTAGG
CGATGGTACGGTTAGCTGGGGCCTTGAAGATGATGAAGATATGACACTTACAAGGTGGACAGGCATGATTATTGGGCCAC
CAAGGACAAATTATGAAAACAGAATATATAGCCTGAAAGTAGAATGTGGACCTAAATACCCAGAAGCTCCTCCATCAGTT
AGATTTGTAACAAAAATTAATATGAATGGAATAAATAATTCCAGTGGAATGGTGGATGCACGCAGCATACCAGTGTTAGC
AAAATGGCAAAATTCATATAGCATTAAAGTTGTACTTCAAGAGTTAAGACGTCTAATGATGTCCAAAGAAAATATGAAGC
TTCCACAACCACCAGAAGGACAAACATACAACAATTAG

Library Parental gene expression (RPM)
SRP017611_liver 9 .14 RPM
SRP017611_kidney 11 .20 RPM
SRP017611_brain 19 .10 RPM
SRP040447_lung 12 .36 RPM
SRP040447_skeletal_muscle 9 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000028827 ortholog_one2one 1 retrogene
retro_cfam_1223,
Felis catus ENSFCAG00000007602 ortholog_one2one 6 retrogenes
retro_fcat_1169, retro_fcat_1256, retro_fcat_141, retro_fcat_15, retro_fcat_1678, retro_fcat_1868,
Macropus eugenii ENSMEUG00000016581 ortholog_one2one 1 retrogene
retro_meug_2093,
Myotis lucifugus ENSMLUG00000002057 ortholog_one2one 6 retrogenes
retro_mluc_1077, retro_mluc_2371, retro_mluc_386, retro_mluc_559, retro_mluc_659, retro_mluc_985,
Macaca mulatta ENSMMUG00000008223 ortholog_one2one 1 retrogene
retro_mmul_1066,
Monodelphis domestica ENSMODG00000010191 ortholog_one2many 10 retrogenes
retro_mdom_1065, retro_mdom_1151, retro_mdom_1167, retro_mdom_1435, retro_mdom_1660, retro_mdom_173, retro_mdom_1979, retro_mdom_736, retro_mdom_786, retro_mdom_979,
Mustela putorius furo ENSMPUG00000001010 ortholog_one2one 2 retrogenes
retro_mputfur_460, retro_mputfur_979,
Oryctolagus cuniculus ENSOCUG00000006933 ortholog_one2one 1 retrogene
retro_ocun_5,
Tupaia belangeri ENSTBEG00000015720 ortholog_one2one 27 retrogenes
retro_tbel_1333, retro_tbel_1456, retro_tbel_1479, retro_tbel_1551, retro_tbel_160, retro_tbel_1740, retro_tbel_1784, retro_tbel_2129, retro_tbel_2149, retro_tbel_2317, retro_tbel_2334, retro_tbel_2496, retro_tbel_2890, retro_tbel_2935, retro_tbel_3021, retro_tbel_3102, retro_tbel_3141, retro_tbel_3461, retro_tbel_3573, retro_tbel_3734, retro_tbel_3935, retro_tbel_3971, retro_tbel_4227, retro_tbel_4319, retro_tbel_4720, retro_tbel_640, retro_tbel_909,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_540 95.10 70.34
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2. retro_cpor_751 67.12 100.00
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3. retro_cpor_849 82.98 96.55
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4. retro_cpor_1277 66.94 81.38
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Download FASTA sequences of all ENSCPOG00000014413 retrocopies