Parental gene:

ZBTB8OS, ENSCPOG00000015349

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_25:4646487..4664949(+)


>ENSCPOG00000015349
GTTCGCCAGAAGAAGGGCGGAAGTAGTGTGTTCGGTTCCGCAATCATGGCGCAGGAAGCAGAGGATGTTAGAGATTACAA
TTTAACTGAGGACCAAAAAGCAATCAAGGCCAAGTATCCTCCAGTCATTCGGAAGTACGAATATTTGGATCACACAGCAG
ATGTCCAGTTACATGCATGGGGGGAGACTCTGGAGGAGGCGTTTGAGCAGTGTGCCATGGCCATGTTTGCTTACATGACA
GACACTGAGACTGTGGAGCCTCTCCAGACGGTAGAGGTAGAAGCCCAAGGAGATGACTTGCAGTCTCTTCTGTTTCACTT
TTTGGATGAATGGCTTTATAAGTTCAGTGCTGATGAATTCTTCATACCCCGGGAAGTGAAAGTACTTAGTATTGATCAAA
GAAATTTCAAATTACGTTCAATTGGGTGGGGAGAAGAATTTTCACTTTCCAAGCATCCTCAGGGAACAGAAGTCAAAGCA
ATAACATATTCAGCAATGCAAGTCTATAATGAAGAAAAACCAGAAGTTTTTGTGATCATTGACATTTAA

Library Parental gene expression (RPM)
SRP017611_brain 5 .46 RPM
SRP017611_kidney 9 .84 RPM
SRP017611_liver 10 .66 RPM
SRP040447_lung 6 .81 RPM
SRP040447_skeletal_muscle 4 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010550 ortholog_one2one 1 retrogene
retro_cfam_2152,
Choloepus hoffmanni ENSCHOG00000004061 ortholog_one2one 2 retrogenes
retro_chof_1005, retro_chof_1158,
Dasypus novemcinctus ENSDNOG00000001861 ortholog_one2one 2 retrogenes
retro_dnov_1056, retro_dnov_2193,
Equus caballus ENSECAG00000020982 ortholog_one2one 1 retrogene
retro_ecab_610,
Felis catus ENSFCAG00000000700 ortholog_one2one 1 retrogene
retro_fcat_703,
Homo sapiens ENSG00000176261 ortholog_one2one 2 retrogenes
retro_hsap_2396, retro_hsap_2992,
Gorilla gorilla ENSGGOG00000007519 ortholog_one2one 2 retrogenes
retro_ggor_2072, retro_ggor_231,
Myotis lucifugus ENSMLUG00000000745 ortholog_one2many 5 retrogenes
retro_mluc_1961, retro_mluc_2533, retro_mluc_2570, retro_mluc_2617, retro_mluc_2622,
Macaca mulatta ENSMMUG00000009939 ortholog_one2one 1 retrogene
retro_mmul_1915,
Monodelphis domestica ENSMODG00000017419 ortholog_one2many 2 retrogenes
retro_mdom_400, retro_mdom_901,
Mus musculus ENSMUSG00000057572 ortholog_one2one 1 retrogene
retro_mmus_2631,
Oryctolagus cuniculus ENSOCUG00000000940 ortholog_one2one 1 retrogene
retro_ocun_492,
Otolemur garnettii ENSOGAG00000011630 ortholog_one2one 1 retrogene
retro_ogar_3231,
Pongo abelii ENSPPYG00000001589 ortholog_one2many 2 retrogenes
retro_pabe_13, retro_pabe_2478,
Tursiops truncatus ENSTTRG00000014968 ortholog_one2one 1 retrogene
retro_ttru_1200,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_356 65.09 57.14
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cpor_903 66.67 51.65
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCPOG00000015349 retrocopies