Parental gene:

ZBTB8OS, ENSDNOG00000001861

Aliases:None
Description:zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:24094]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6043:7406..18088(-)


>ENSDNOG00000001861
ATGAAGGGCGGAAGCAGAATGGGGATCATGGCGCAGCCTGAGGAAGACGTGAGAGACTACAATTTGACTGAGGAGCAAAA
GGCAGTCAAGGCCAAGTATCCTCCAGTCAGTCGAAAGTACGAGTATTTGGATCATACAGCCGATGTCCAGTTACACGCAT
GGGGAAATACTCTGGAGGAAGCATTTGAGCAGTGTGCAATGGCCATGTTTGGTTACATGACAGATACTGGAACTGTTGAG
CCCTTTCAAACAGTAGAAGTAGAAACCCAAGGAGATGACTTACAGTCTCTTCTTTTCCACTTTTTGGATGAGTGGCTTTA
TAAATTCAGTGCTGATGAGTTCTTTATACCCAGGGAAGTGAAAGTACTCAGTATTGATCAAAGAAATTTCAAATTACGGT
CAATTGGGTGGGGAGAAGAGTTTTCATTGTCCAAGCACCCTCAGGGAACTGAAGTCAAGGCAATAACATATTCAGCAATG
CAGATCTATAGTGAAGAGAAGCCAGAAGTTTTTGTGATCATTGACATTTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 26 .06 RPM
SRP012922_cerebellum 14 .57 RPM
SRP012922_heart 12 .30 RPM
SRP012922_kidney 21 .63 RPM
SRP012922_liver 19 .51 RPM
SRP012922_lung 12 .83 RPM
SRP012922_quadricep_muscle 13 .33 RPM
SRP012922_spleen 17 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010550 ortholog_one2one 1 retrogene
retro_cfam_2152,
Choloepus hoffmanni ENSCHOG00000004061 ortholog_one2one 2 retrogenes
retro_chof_1005, retro_chof_1158,
Cavia porcellus ENSCPOG00000015349 ortholog_one2one 2 retrogenes
retro_cpor_356, retro_cpor_903,
Equus caballus ENSECAG00000020982 ortholog_one2one 1 retrogene
retro_ecab_610,
Felis catus ENSFCAG00000000700 ortholog_one2one 1 retrogene
retro_fcat_703,
Homo sapiens ENSG00000176261 ortholog_one2one 2 retrogenes
retro_hsap_2396, retro_hsap_2992,
Gorilla gorilla ENSGGOG00000007519 ortholog_one2one 2 retrogenes
retro_ggor_2072, retro_ggor_231,
Myotis lucifugus ENSMLUG00000000745 ortholog_one2many 5 retrogenes
retro_mluc_1961, retro_mluc_2533, retro_mluc_2570, retro_mluc_2617, retro_mluc_2622,
Macaca mulatta ENSMMUG00000009939 ortholog_one2one 1 retrogene
retro_mmul_1915,
Monodelphis domestica ENSMODG00000017419 ortholog_one2many 2 retrogenes
retro_mdom_400, retro_mdom_901,
Mus musculus ENSMUSG00000057572 ortholog_one2one 1 retrogene
retro_mmus_2631,
Oryctolagus cuniculus ENSOCUG00000000940 ortholog_one2one 1 retrogene
retro_ocun_492,
Otolemur garnettii ENSOGAG00000011630 ortholog_one2one 1 retrogene
retro_ogar_3231,
Pongo abelii ENSPPYG00000001589 ortholog_one2many 2 retrogenes
retro_pabe_13, retro_pabe_2478,
Tursiops truncatus ENSTTRG00000014968 ortholog_one2one 1 retrogene
retro_ttru_1200,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1056 61.54 51.70
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2. retro_dnov_2193 82.07 80.11
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Download FASTA sequences of all ENSDNOG00000001861 retrocopies