Parental gene:

ENSPPYG00000001589

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:1:197571471..197604341(+)


>ENSPPYG00000001589
ATGAAGGGCGGAAGTAGAGTGTCTAATCCTGCAGTCATGGCGCAGGAAGAGGAAGATGTTAGAGATTACAATTTGACTGA
AGAACAGAAGGCGATCAAGGCCAAGTATCCGCCAGTCAATAGGAAGTACGAGTATTTGGATCATACAGCAGATGTCCAGT
TACACGCATGGGGAGATACTCTGGAGGAAGCATTCGAGCAATGTGCAATGGCCATGTTTGGTTACATGACAGATACTGGG
ACAGTGGAGCCCCTCCAAACAGTAGAAGTAGAAACCCAAGGAGATGACTTACAGTCTCTTCTGTTTCACTTTTTGGATGA
ATGGCTTTATAAGTTCAGTGCTGATGAATTCTTCATACCCCGGGAAGTGAAAGTACTTAGCATTGATCAAAGAAATTTCA
AATTACGATCAATTGGGTGGGGAGAAGAATTTTCATTGTCCAAGCACCCTCAGGGAACAGAAGTCAAAGCAATAACATAT
TCAGCAATGCAGGTCTATAATGAAGAGAAGCCGGAAGTTTTTGTGATCATTGACATTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 13 .38 RPM
SRP007412_cerebellum 15 .56 RPM
SRP007412_heart 11 .83 RPM
SRP007412_kidney 28 .11 RPM
SRP007412_liver 18 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010550 ortholog_one2many 1 retrogene
retro_cfam_2152,
Choloepus hoffmanni ENSCHOG00000004061 ortholog_one2many 2 retrogenes
retro_chof_1005, retro_chof_1158,
Cavia porcellus ENSCPOG00000015349 ortholog_one2many 2 retrogenes
retro_cpor_356, retro_cpor_903,
Dasypus novemcinctus ENSDNOG00000001861 ortholog_one2many 2 retrogenes
retro_dnov_1056, retro_dnov_2193,
Equus caballus ENSECAG00000020982 ortholog_one2many 1 retrogene
retro_ecab_610,
Felis catus ENSFCAG00000000700 ortholog_one2many 1 retrogene
retro_fcat_703,
Homo sapiens ENSG00000176261 ortholog_one2many 2 retrogenes
retro_hsap_2396, retro_hsap_2992,
Gorilla gorilla ENSGGOG00000007519 ortholog_one2many 2 retrogenes
retro_ggor_2072, retro_ggor_231,
Myotis lucifugus ENSMLUG00000000745 ortholog_many2many 5 retrogenes
retro_mluc_1961, retro_mluc_2533, retro_mluc_2570, retro_mluc_2617, retro_mluc_2622,
Macaca mulatta ENSMMUG00000009939 ortholog_one2many 1 retrogene
retro_mmul_1915,
Monodelphis domestica ENSMODG00000017419 ortholog_many2many 2 retrogenes
retro_mdom_400, retro_mdom_901,
Mus musculus ENSMUSG00000057572 ortholog_one2many 1 retrogene
retro_mmus_2631,
Oryctolagus cuniculus ENSOCUG00000000940 ortholog_one2many 1 retrogene
retro_ocun_492,
Otolemur garnettii ENSOGAG00000011630 ortholog_one2many 1 retrogene
retro_ogar_3231,
Tursiops truncatus ENSTTRG00000014968 ortholog_one2many 1 retrogene
retro_ttru_1200,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_13 95.83 93.85
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2. retro_pabe_2478 81.66 94.41
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Download FASTA sequences of all ENSPPYG00000001589 retrocopies