Parental gene:

PRR3, ENSCPOG00000022770

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_314:187780..191312(-)


>ENSCPOG00000022770
ATGCCGAAACGAAAGAAGCAGAGTCAGCAGCAGCCGCCGCCACAGCATCCTACACTGCCCGATCGCGAAGAGACTGGAGA
TGAAGAGGAGAGCCCCATCGGACCGCCCAGCCTTCTGGGCCCTCCCCCCATGGCCAATGGAGAGCCTGGTGATCCTACGC
CAGCTTTTCGTAGAGGTCCTCCAGGATCCAGAAGACTGAGGATCCCACCGCTGCTGAGCCTCCCCCCTCCTCCCAGGGGA
AGAGGCCCATTTAGGGGAGGCCTGGGCCCCAGGACTGGTCCATATGGTCGTGGTTGGTGGGGGGTCAATGCTGAACCTCT
TTTTCGGGGGCCAGGCCACAGGGGTCCCCCCAGGGAAAGCTTCTACAAAGAGCAGACAAACCCAAGAAGGCTCAGAAGTT
GGTCTCTTGCCAAGAGAACCTGCCCACCGAAGGACAGCCCTCAGGTTGTGGAAGATAAATCCAACCGCCCTGTCTGCCGA
CACTTTTCCAAAAAGGGCCACTGCCGATACGAGGATCTCTGTGCCTTCTACCACCCGGGGGACAATGGGCCTCCTCTGTG
A

Library Parental gene expression (RPM)
SRP017611_brain 7 .71 RPM
SRP017611_kidney 10 .36 RPM
SRP017611_liver 3 .18 RPM
SRP040447_lung 10 .26 RPM
SRP040447_skeletal_muscle 3 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000025918 ortholog_one2one 2 retrogenes
retro_fcat_1094, retro_fcat_1698,
Gorilla gorilla ENSGGOG00000014604 ortholog_one2one 1 retrogene
retro_ggor_1915,
Myotis lucifugus ENSMLUG00000008758 ortholog_one2one 1 retrogene
retro_mluc_1567,
Macaca mulatta ENSMMUG00000013893 ortholog_one2one 1 retrogene
retro_mmul_1431,
Nomascus leucogenys ENSNLEG00000005104 ortholog_one2one 1 retrogene
retro_nleu_1548,
Otolemur garnettii ENSOGAG00000004430 ortholog_one2one 2 retrogenes
retro_ogar_1030, retro_ogar_1324,
Pongo abelii ENSPPYG00000016409 ortholog_one2one 1 retrogene
retro_pabe_2279,
Pan troglodytes ENSPTRG00000017929 ortholog_one2one 1 retrogene
retro_ptro_1861,
Sorex araneus ENSSARG00000002747 ortholog_one2many 2 retrogenes
retro_sara_143, retro_sara_9,
Ictidomys tridecemlineatus ENSSTOG00000011829 ortholog_one2many 1 retrogene
retro_itri_126,
Tarsius syrichta ENSTSYG00000000166 ortholog_one2one 2 retrogenes
retro_tsyr_308, retro_tsyr_841,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_775 51.66 78.49
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Download FASTA sequences of all ENSCPOG00000022770 retrocopies