Parental gene:

PRR3, ENSMMUG00000013893

Aliases:None
Description:proline-rich protein 3 [Source:RefSeq peptide;Acc:NP_001244515]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:4:30137836..30144922(+)


>ENSMMUG00000013893
CTACCAACTCGCACGGAGAGAGGCAGTTTACTCCAGAATGCGGCCGCCACAGATGTTCTCCGCAACCTTCCGGAAGTGGA
ATGGTGGGAGCTTGGGCATTGCTGCCCACCGACCCCCCGGAAGCGGAAACAGAATCCCCGCGTGCCCCTTCCTCACTACC
CTCCAAATCCCGCTGCAGCCATTGCCGCAGCCACGATGCCGAAACGAAAGAAGCAGAATCAGCACCAGCCACCGACACAG
CAGCAACCCCCACTGCCCGAGCGGGAAGAGACTGGAGATGAGGAGGATGGGAGTCCCATCGGACCACCCAGCCTTCTGGG
CCCTCCCCCCATGGCCAATGGAAAACCTGGCGACCCTAAGTCAGCTCTTCACAGAGGTCCTCCAGGATCAAGGGGACCAC
TGATTCCACCACTGCTGAGTCTCCCACCTCCTCCTTGGGGTAGAGGCCCAATTCGGAGAGGCCTTGGCCCCAGGTCTAGC
CCATATGGTCGTGGTTGGTGGGGAGTCAATGTTGAACCTCCTTTTCCGGGGCCAGGTCATGGGGGTCCCACCAGGGGAAG
CTTTCACAAAGAACAGAGAAACCCTCGAAGGCTCAAAAGCTGGTCTCTTATCAAGAATACCTGCCCGCCCAAGGATGACC
CCCAGGTTATGGAAGACAAATCCGACCGCCCTGTCTGCCGACATTTTGCCAAAAAGGGTCACTGTCGATATGAGGACCTC
TGTGCCTTCTACCATCCAGGCGTCAATGGACCTCCTCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .56 RPM
SRP007412_brain 16 .25 RPM
SRP007412_cerebellum 16 .47 RPM
SRP007412_heart 3 .77 RPM
SRP007412_kidney 7 .98 RPM
SRP007412_liver 5 .15 RPM
SRP007412_testis 5 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000022770 ortholog_one2one 1 retrogene
retro_cpor_775,
Felis catus ENSFCAG00000025918 ortholog_one2one 2 retrogenes
retro_fcat_1094, retro_fcat_1698,
Gorilla gorilla ENSGGOG00000014604 ortholog_one2one 1 retrogene
retro_ggor_1915,
Myotis lucifugus ENSMLUG00000008758 ortholog_one2one 1 retrogene
retro_mluc_1567,
Nomascus leucogenys ENSNLEG00000005104 ortholog_one2one 1 retrogene
retro_nleu_1548,
Otolemur garnettii ENSOGAG00000004430 ortholog_one2one 2 retrogenes
retro_ogar_1030, retro_ogar_1324,
Pongo abelii ENSPPYG00000016409 ortholog_one2one 1 retrogene
retro_pabe_2279,
Pan troglodytes ENSPTRG00000017929 ortholog_one2one 1 retrogene
retro_ptro_1861,
Sorex araneus ENSSARG00000002747 ortholog_one2many 2 retrogenes
retro_sara_143, retro_sara_9,
Ictidomys tridecemlineatus ENSSTOG00000011829 ortholog_one2many 1 retrogene
retro_itri_126,
Tarsius syrichta ENSTSYG00000000166 ortholog_one2one 2 retrogenes
retro_tsyr_308, retro_tsyr_841,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1431 75.34 57.31
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Download FASTA sequences of all ENSMMUG00000013893 retrocopies