Parental gene:

RBM22, ENSDNOG00000011166

Aliases:None
Description:RNA binding motif protein 22 [Source:HGNC Symbol;Acc:25503]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_10574:1183..11569(+)


>ENSDNOG00000011166
ACCAAAGAAAAGTATGGGAAGGAATGCAAAATCTGTGCCAGGCCATTCACAGTGTTTCGCTGGTGTCCTGGGGTTCGCAT
GCGTTTCAAGAAGACCGAAGTATGCCAAACTTGCAGCAAATTGAAGAATGTCTGTCAGACCTGCCTCTTGGACCTAGAAT
ATGGCCTGCCCATCCAGGTTCGCGATGCAGGTTTGTCTTTTAAGGATGACATGCCAAAGTCAGATGTCAACAAAGAGTAC
TATACACAGAATATGGAAAGAGAGATTTCCAACTCTGATGGAACACGGCCCGTTGGCATGCTGGGGAAAGCCACATCCAC
CAGTGACATGTTGCTCAAACTAGCCCGGACCACACCCTACTATAAACGGAATCGACCCCACATTTGCTCTTTCTGGGTGA
AAGGAGAGTGTAAGAGAGGAGAGGAGTGCCCATACAGACATGAGAAGCCTACAGATCCAGATGACCCCCTTGCTGATCAG
AATATCAAAGACCGATATTACGGAATCAATGACCCTGTGGCAGATAAGCTTCTAAAGCGGGCTTCAACAATGCCTCGTCT
GGACCCACCAGAGGATAAGACTATCACCACACTATATGTTGGTGGTCTGGGCGATACTATTACTGAGACAGATCTAAGAA
ATCATTTCTACCAGTTTGGAGAGATTCGGACAATAACTGTTGTACAGAGGCAACAGTGTGCTTTCATCCAATTTGCCACA
AGGCAAGCTGCAGAAGTGGCTGCTGAAAAATCCTTTAATAAGTTGATTGTCAATGGCCGCAGACTCAACGTGAAATGGGG
AAGATCCCAAGCTGCCAGAGGAAAAGAAAAAGAGAAGGATGGAACCACAGACTCTGGAATCAAGCTAGAGCCTGTTCCAG
GGCTGCCAGGAGCTCTTCCTCCTCCTCCTGCAGCAGAAGAAGAAGCCTCTGCCAACTACTTTAACCTACCCCCAAGTGGT
CCTCCAGCCGTGGTGAACATTGCCCTGCCACCACCTCCTGGTATTGCTCCGCCCCCGCCCCCAGGTTTTGGTCCACACAT
GTTCCACCCAATGGGGCCACCCCCGCCTTTCATGAGGGCTCCAGGACCAATCCACTATCCTTCTCAGGACCCTCAGAGGA
TGGGAGCTCATGCTGGGAAACACAGCAGCCCCTAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 23 .14 RPM
SRP012922_cerebellum 30 .66 RPM
SRP012922_heart 8 .35 RPM
SRP012922_kidney 13 .14 RPM
SRP012922_liver 12 .85 RPM
SRP012922_lung 36 .50 RPM
SRP012922_quadricep_muscle 12 .29 RPM
SRP012922_spleen 36 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018082 ortholog_one2one 1 retrogene
retro_cfam_1480,
Callithrix jacchus ENSCJAG00000020963 ortholog_one2one 6 retrogenes
retro_cjac_1338, retro_cjac_2471, retro_cjac_3342, retro_cjac_3390, retro_cjac_3934, retro_cjac_990,
Cavia porcellus ENSCPOG00000001946 ortholog_one2one 2 retrogenes
retro_cpor_280, retro_cpor_283,
Homo sapiens ENSG00000086589 ortholog_one2one 2 retrogenes
retro_hsap_3465, retro_hsap_4273,
Gorilla gorilla ENSGGOG00000012947 ortholog_one2one 2 retrogenes
retro_ggor_2337, retro_ggor_2859,
Myotis lucifugus ENSMLUG00000009040 possible_ortholog 2 retrogenes
retro_mluc_1453, retro_mluc_153,
Macaca mulatta ENSMMUG00000020683 ortholog_one2one 4 retrogenes
retro_mmul_1199, retro_mmul_1348, retro_mmul_1553, retro_mmul_1762,
Monodelphis domestica ENSMODG00000009574 possible_ortholog 1 retrogene
retro_mdom_186,
Pongo abelii ENSPPYG00000015955 ortholog_one2one 4 retrogenes
retro_pabe_1412, retro_pabe_1594, retro_pabe_2861, retro_pabe_3486,
Pan troglodytes ENSPTRG00000017423 ortholog_one2one 2 retrogenes
retro_ptro_2348, retro_ptro_2898,
Tarsius syrichta ENSTSYG00000003939 ortholog_one2one 3 retrogenes
retro_tsyr_1090, retro_tsyr_1187, retro_tsyr_1231,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_2298 68.70 66.67
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Download FASTA sequences of all ENSDNOG00000011166 retrocopies