Parental gene: | RBM22, ENSPTRG00000017423 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 5:151557831..151568157(-) |
>ENSPTRG00000017423
ATGGCGACCTCTCTGGGTTCCAACACCTACAACAGGCAGAACTGGGAGGATGCGGACTTCCCCATTCTGTGCCAGACATG
TCTTGGAGAAAACCCATATATCCGAATGACCAAAGAAAAGTATGGGAAGGAATGCAAAATCTGTGCCAGGCCATTCACAG
TGTTTCGCTGGTGCCCTGGAGTCCGCATGCGTTTCAAGAAGACTGAAGTGTGCCAAACCTGCAGTAAATTGAAGAATGTC
TGTCAGACCTGCCTCTTAGACCTAGAGTATGGCCTGCCCATCCAGGTTCGTGACGCAGGATTGTCTTTTAAAGACGACAT
GCCAAAGTCAGATGTCAACAAAGAGTACTATACACAGAATATGGAGAGAGAGATTTCTAACTCTGATGGAACACGGCCAG
TTGGCATGCTGGGGAAAGCCACATCTACCAGTGACATGCTGCTCAAACTGGCCCGGACCACACCCTACTACAAAAGGAAT
CGACCCCACATTTGCTCCTTCTGGGTGAAAGGAGAGTGTAAGAGAGGAGAGGAATGTCCATACAGACATGAGAAGCCTAC
AGATCCAGATGACCCCCTTGCTGATCAGAATATTAAAGATCGTTATTACGGAATCAATGATCCTGTGGCTGACAAGCTTC
TAAAGCGGGCTTCAACAATGCCTCGGCTGGACCCACCAGAGGATAAAACTATCACCACACTATATGTTGGTGGTCTAGGT
GATACCATTACTGAGACAGATTTAAGAAATCATTTCTACCAGTTCGGAGAGATCCGGACGATCACTGTTGTGCAGAGACA
GCAGTGTGCTTTCATCCAGTTTGCCACACGGCAGGCTGCAGAAGTGGCTGCTGAGAAGTCCTTTAATAAGTTGATTGTAA
ATGGCCGCAGACTGAATGTGAAATGGGGAAGATCCCAGGCAGCCAGAGGAAAAGAAAAAGAGAAAGATGGAACTACAGAC
TCTGGGATCAAACTGGAACCTGTTCCAGGATTGCCAGGAGCTCTTCCTCCTCCTCCTGCGGCAGAAGAAGAAGCCTCTGC
CAACTACTTCAACTTGCCCCCAAGTGGTCCTCCAGCTGTGGTGAACATTGCTCTGCCACCGCCCCCTGGCATTGCTCCAC
CCCCACCCCCAGGTTTTGGGCCACACATGTTCCACCCAATGGGACCACCCCCTCCTTTCATGCGGGCTCCAGGACCAATC
CACTATCCTTCTCAGGACCCTCAGAGGATGGGAGCTCATGCTGGAAAACACAGCAGCCCCTAG
ATGGCGACCTCTCTGGGTTCCAACACCTACAACAGGCAGAACTGGGAGGATGCGGACTTCCCCATTCTGTGCCAGACATG
TCTTGGAGAAAACCCATATATCCGAATGACCAAAGAAAAGTATGGGAAGGAATGCAAAATCTGTGCCAGGCCATTCACAG
TGTTTCGCTGGTGCCCTGGAGTCCGCATGCGTTTCAAGAAGACTGAAGTGTGCCAAACCTGCAGTAAATTGAAGAATGTC
TGTCAGACCTGCCTCTTAGACCTAGAGTATGGCCTGCCCATCCAGGTTCGTGACGCAGGATTGTCTTTTAAAGACGACAT
GCCAAAGTCAGATGTCAACAAAGAGTACTATACACAGAATATGGAGAGAGAGATTTCTAACTCTGATGGAACACGGCCAG
TTGGCATGCTGGGGAAAGCCACATCTACCAGTGACATGCTGCTCAAACTGGCCCGGACCACACCCTACTACAAAAGGAAT
CGACCCCACATTTGCTCCTTCTGGGTGAAAGGAGAGTGTAAGAGAGGAGAGGAATGTCCATACAGACATGAGAAGCCTAC
AGATCCAGATGACCCCCTTGCTGATCAGAATATTAAAGATCGTTATTACGGAATCAATGATCCTGTGGCTGACAAGCTTC
TAAAGCGGGCTTCAACAATGCCTCGGCTGGACCCACCAGAGGATAAAACTATCACCACACTATATGTTGGTGGTCTAGGT
GATACCATTACTGAGACAGATTTAAGAAATCATTTCTACCAGTTCGGAGAGATCCGGACGATCACTGTTGTGCAGAGACA
GCAGTGTGCTTTCATCCAGTTTGCCACACGGCAGGCTGCAGAAGTGGCTGCTGAGAAGTCCTTTAATAAGTTGATTGTAA
ATGGCCGCAGACTGAATGTGAAATGGGGAAGATCCCAGGCAGCCAGAGGAAAAGAAAAAGAGAAAGATGGAACTACAGAC
TCTGGGATCAAACTGGAACCTGTTCCAGGATTGCCAGGAGCTCTTCCTCCTCCTCCTGCGGCAGAAGAAGAAGCCTCTGC
CAACTACTTCAACTTGCCCCCAAGTGGTCCTCCAGCTGTGGTGAACATTGCTCTGCCACCGCCCCCTGGCATTGCTCCAC
CCCCACCCCCAGGTTTTGGGCCACACATGTTCCACCCAATGGGACCACCCCCTCCTTTCATGCGGGCTCCAGGACCAATC
CACTATCCTTCTCAGGACCCTCAGAGGATGGGAGCTCATGCTGGAAAACACAGCAGCCCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .61 RPM |
| SRP007412_cerebellum | 42 .77 RPM |
| SRP007412_heart | 15 .16 RPM |
| SRP007412_kidney | 32 .25 RPM |
| SRP007412_liver | 19 .18 RPM |
| SRP007412_testis | 24 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000018082 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020963 | ortholog_one2one | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000001946 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000011166 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000086589 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012947 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000009040 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000020683 | ortholog_one2one | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000009574 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015955 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000003939 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2348 | 66.96 | 52.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2898 | 71.37 | 60.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000017423 retrocopies