Parental gene:

ENSMODG00000009574

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:343431455..343454069(+)


>ENSMODG00000009574
ATGGCGACGTCTCTGGGCTCCAACACCTACAACAGGCAGAACTGGGAGGACGCGGACTTCCCTATTCTGTGTCAGACGTG
CCTTGGAGAAAATCCCTACATTCGGATGACCAAAGAAAAGTATGGAAAAGAATGCAAAATTTGTGCCAGGCCGTTCACAG
TGTTCCGCTGGTGCCCCGGTGTTCGCATGCGTTTTAAGAAGACTGAAGTGTGCCAAACCTGCAGCAAGCTAAAAAATGTG
TGTCAGACCTGCCTTTTGGACCTAGAATATGGCTTACCTATTCAGGTCCGTGATGCAGGACTGTCCTTTAAAGATGACAT
GCCTAAGTCTGACGTGAACAAAGAATACTATACACAGAATGTTGAGCGAGAGATTTCTAACTCTGATGGAACCCGGCCAG
TTGGTGTTCTTGGGAAGGCTACAGCTACCAGTGACATGCTGCTCAAATTGGCTCGGACCACCCCTTACTACAAACGGAAT
CGTCCTCACATTTGTTCCTTCTGGGTGAAAGGAGAATGTAAAAGAGGAGAGGAGTGTCCATATAGACATGAGAAGCCTAC
AGATCCTGATGATCCTCTTGCTGATCAGAATATCAAGGATCGATATTATGGCATTAATGACCCTGTGGCAGACAAGCTTC
TGAAAAGGGCTTCAACAATGCCTCGTCTGGACCCCCCAGATGATAAGACCATCACCACACTATATGTTGGAGGCCTTGGA
GATACAATCAGTGAGACAGATCTCAGAAATCATTTTTACCAATTTGGTGAGATCCGAACGATAACAGTTGTACAGAGGCA
ACAGTGTGCTTTCATCCAGTTTGCCACAAGGCAAGCTGCAGAGATGGCTGCTGAGAAGTCCTTTAACAAATTGATTGTAA
ATGGACGAAGGCTTAATGTGAAATGGGGAAGATCACAGGCAGCCAGAGGAAAAGAAAAGGAAAAAGAAGGAACCACAGAC
TCTGGAATTAAGCTGGAGCCTGTTCCAGGACTTCCTGGAGCTCTTCCTCCTCCTCCAGCAGCTGAAGAAGAAGCCTCTGC
CAATTATTTTAATCTCCCTCCCAGTGGTCCTCCAGCAGTGGTGAATATTGCCCTGCCCCCACCTCCTGGAATTGCACCTC
CACCCCCACCAGGTTTTGGACCACACATGTTCCACCCAATGGGACCACCTCCTCCCTTCATGCGAGCTCCAGGCCCCATC
CACTATCCTTCCCAGGATCCCCAGAGGATGGGGGCTCATGCAGGAAAGCACAGCAGTCCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 200 .01 RPM
SRP007412_cerebellum 153 .11 RPM
SRP007412_heart 69 .37 RPM
SRP007412_kidney 146 .17 RPM
SRP007412_liver 127 .38 RPM
SRP007412_testis 155 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018082 possible_ortholog 1 retrogene
retro_cfam_1480,
Callithrix jacchus ENSCJAG00000020963 possible_ortholog 6 retrogenes
retro_cjac_1338, retro_cjac_2471, retro_cjac_3342, retro_cjac_3390, retro_cjac_3934, retro_cjac_990,
Cavia porcellus ENSCPOG00000001946 possible_ortholog 2 retrogenes
retro_cpor_280, retro_cpor_283,
Dasypus novemcinctus ENSDNOG00000011166 possible_ortholog 1 retrogene
retro_dnov_2298,
Homo sapiens ENSG00000086589 possible_ortholog 2 retrogenes
retro_hsap_3465, retro_hsap_4273,
Gorilla gorilla ENSGGOG00000012947 possible_ortholog 2 retrogenes
retro_ggor_2337, retro_ggor_2859,
Myotis lucifugus ENSMLUG00000009040 possible_ortholog 2 retrogenes
retro_mluc_1453, retro_mluc_153,
Macaca mulatta ENSMMUG00000020683 possible_ortholog 4 retrogenes
retro_mmul_1199, retro_mmul_1348, retro_mmul_1553, retro_mmul_1762,
Nomascus leucogenys ENSNLEG00000010397 possible_ortholog 2 retrogenes
retro_nleu_1691, retro_nleu_1800,
Otolemur garnettii ENSOGAG00000011086 ortholog_one2many 1 retrogene
retro_ogar_2206,
Pongo abelii ENSPPYG00000015955 possible_ortholog 4 retrogenes
retro_pabe_1412, retro_pabe_1594, retro_pabe_2861, retro_pabe_3486,
Pan troglodytes ENSPTRG00000017423 possible_ortholog 2 retrogenes
retro_ptro_2348, retro_ptro_2898,
Ictidomys tridecemlineatus ENSSTOG00000027197 possible_ortholog 1 retrogene
retro_itri_1188,
Tarsius syrichta ENSTSYG00000003939 possible_ortholog 3 retrogenes
retro_tsyr_1090, retro_tsyr_1187, retro_tsyr_1231,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_186 92.40 99.76
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Download FASTA sequences of all ENSMODG00000009574 retrocopies