Parental gene:

Rnf4, ENSDORG00000006675

Aliases:None
Description:ring finger protein 4 [Source:MGI Symbol;Acc:MGI:1201691]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:scaffold_16249:5992..15906(-)


>ENSDORG00000006675
GTAACCAGTGGACACAAGAAGTTGAAAACATTTGACTTCACTGCAAACCCTGGTATATTGCTTTTCTATACGTTGGAGCC
AAAGAACAAAATGAGTACGAGAAAGCGTCGTGGTGGGTCAGTAAGTTCTAGACAAGCACAGAAGCGAACTCGGGAAGCAG
CTGCCACCCCTGAGATTTCCTTGGAAGCTGAACCCATAGAGCTTGTGGAAACTGCTGGAGATGAAATTGTGGACCTCACC
TGTGAATCTTTGGAGCCAGTGGTTGTCGATCTGACTCATAATGACTCTGTGGTGGTAAGCAGTAGGAGGCGGCCAAGGAG
GAATGCAAGAAGGCTGCGCCAAGACCATGCGGACAGCTGCGTGGTGAGCAGCGATGAGGAGGAGCTGTCCAGGGACAGAG
ATGTGTATGTGACCACCCACGCTCCCAGAGGCGCGAGGGAGGAGGGGACCACAGGCCCCAGGCCCTCCGGTACTGTCAGT
TGTCCAATCTGCATGGATGGGTACTCTGAGATTGTGCAGAACGGTCGTCTGATTGTTTCTACAGAATGTGGCCATGTCTT
CTGTAGCCAGTGCCTCCGTGATTCCCTTAAGAATGCTAACACTTGCCCAACTTGTAGGAAAAAGATCAGCCACAAACGGT
ACCACCCCATTTATATATGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014366 ortholog_one2one 1 retrogene
retro_amel_77,
Canis familiaris ENSCAFG00000014856 ortholog_one2one 1 retrogene
retro_cfam_25,
Equus caballus ENSECAG00000024877 ortholog_one2one 1 retrogene
retro_ecab_33,
Echinops telfairi ENSETEG00000001683 ortholog_one2one 3 retrogenes
retro_etel_469, retro_etel_626, retro_etel_627,
Felis catus ENSFCAG00000004051 ortholog_one2one 1 retrogene
retro_fcat_897,
Loxodonta africana ENSLAFG00000007382 ortholog_one2one 1 retrogene
retro_lafr_44,
Myotis lucifugus ENSMLUG00000005969 ortholog_one2one 1 retrogene
retro_mluc_1640,
Nomascus leucogenys ENSNLEG00000000160 possible_ortholog 2 retrogenes
retro_nleu_1713, retro_nleu_37,
Oryctolagus cuniculus ENSOCUG00000004998 possible_ortholog 2 retrogenes
retro_ocun_1566, retro_ocun_162,
Ochotona princeps ENSOPRG00000004317 ortholog_one2one 3 retrogenes
retro_opri_112, retro_opri_783, retro_opri_863,
Procavia capensis ENSPCAG00000004528 ortholog_one2one 1 retrogene
retro_pcap_208,
Pongo abelii ENSPPYG00000025865 possible_ortholog 2 retrogenes
retro_pabe_1240, retro_pabe_36,
Sus scrofa ENSSSCG00000008690 ortholog_one2one 1 retrogene
retro_sscr_181,
Ictidomys tridecemlineatus ENSSTOG00000011101 possible_ortholog 2 retrogenes
retro_itri_1108, retro_itri_171,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_347 85.52 65.30
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2. retro_dord_411 77.93 100.00
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Download FASTA sequences of all ENSDORG00000006675 retrocopies