Parental gene: | RNF4, ENSOPRG00000004317 |
| Aliases: | None |
| Description: | ring finger protein 4 [Source:HGNC Symbol;Acc:10067] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_269:1652..13801(+) |
>ENSOPRG00000004317
AGAAAGCGTCGTGGTGGGACAGCACATTCTAGACAGACGCAGAAGCGGACCCGGGAAGCAGCTTCTACTCCTGAGATCGC
CTTGGAAGCAGAACCCATAGAACTTGTGGAAACTGCGGGAGATGAAATCGTGGACCTCACCTGTGAATCCCTGGAGCCCG
TGGTGGTCGACCTGACCCACAATGACTCCGTTGTGGTAAGTCGGAGGAGGCCGAGGAGGAACGCGCGGAGGCTCCGTCAG
GACCATGCCGACAGCTGTGTGCTGAGCAGTGACGAGGAGGAGCTGGCCAGGGACCGAGACGTGTATGTGACCACCCACAC
TCCCACAAGTGCCAGGACTGATGGAGCTGCGGGGCTTAGGTCCTCGGGTACTGTGAGCTGCCCCATCTGCATGGACGGAT
ACTCAGAGATTGTGCAGAGCGGACGTCTCATTGTTTCTACAGAATGTGGCCACGTCTTCTGTAGCCAGTGCCTCCGTGAT
TCCCTCAAGAGTGCTAACACTTGCCCAACTTGTAGGAAAAAGATCAACCACAAACGGTATCACCCCATTTACATATGA
AGAAAGCGTCGTGGTGGGACAGCACATTCTAGACAGACGCAGAAGCGGACCCGGGAAGCAGCTTCTACTCCTGAGATCGC
CTTGGAAGCAGAACCCATAGAACTTGTGGAAACTGCGGGAGATGAAATCGTGGACCTCACCTGTGAATCCCTGGAGCCCG
TGGTGGTCGACCTGACCCACAATGACTCCGTTGTGGTAAGTCGGAGGAGGCCGAGGAGGAACGCGCGGAGGCTCCGTCAG
GACCATGCCGACAGCTGTGTGCTGAGCAGTGACGAGGAGGAGCTGGCCAGGGACCGAGACGTGTATGTGACCACCCACAC
TCCCACAAGTGCCAGGACTGATGGAGCTGCGGGGCTTAGGTCCTCGGGTACTGTGAGCTGCCCCATCTGCATGGACGGAT
ACTCAGAGATTGTGCAGAGCGGACGTCTCATTGTTTCTACAGAATGTGGCCACGTCTTCTGTAGCCAGTGCCTCCGTGAT
TCCCTCAAGAGTGCTAACACTTGCCCAACTTGTAGGAAAAAGATCAACCACAAACGGTATCACCCCATTTACATATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000014366 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000014856 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000006675 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000024877 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000001683 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000004051 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000007382 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005969 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000160 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004998 | possible_ortholog | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000004528 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025865 | possible_ortholog | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000008690 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011101 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_112 | 52.10 | 61.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_783 | 52.10 | 61.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_863 | 53.57 | 58.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000004317 retrocopies