Parental gene:

PPP1CC, ENSECAG00000017228

Aliases:None
Description:protein phosphatase 1, catalytic subunit, gamma isozyme [Source:HGNC Symbol;Acc:9283]
Organism:Horse (Equus caballus)
Coordinates:8:21204017..21212872(+)


>ENSECAG00000017228
GTGAGGGGGTCCAAGCCTGGTAAGAATGTCCAGCTCCAGGAGAATGAAATCAGAGGACTGTGCTTAAAGTCTCGAGAGAT
CTTTCTCAGTCAGCCTATCCTACTAGAACTGGAAGCGCCACTCAAAATATGTGGTGATATCCATGGGCAATACTATGATT
TGCTTCGACTTTTTGAGTACGGTGGTTTCCCACCAGAGAGCAACTACCTGTTTCTTGGGGACTATGTGGACAGGGGGAAG
CAGTCGTTGGAGACTATCTGCCTCTTACTGGCTTACAAAATCAAATATCCTGAGAATTTTTTTCTTCTCAGAGGAAACCA
TGAATGTGCCAGCATCAATAGAATTTATGGATTTTATGATGAATGTAAAAGAAGATATAACATTAAACTATGGAAAACTT
TCACAGACTGCTTTAACTGTTTACCGATAGCAGCCATCGTAGATGAGAAAATATTCTGCTGTCATGGAGGTTTATCACCA
GATCTTCAATCTATGGAGCAGATTCGGCGAATTATGCGACCAACTGATGTACCAGATCAAGGTCTTCTTTGTGATCTTTT
GTGGTCTGACCCCGATAAAGATGTCTTAGGCTGGGGTGAAAATGACAGAGGAGTGTCCTTCACATTTGGTGCAGAAGTGG
TTGCAAAATTTCTCCATAAGCATGATTTGGATCTTATATGTAGAGCCCATCAGGTGGTTGAAGATGGATACGAATTTTTT
GCAAAGAGGCAATTGGTCACTCTGTTTTCTGCACCCAATTATTGTGGCGAGTTTGACAATGCAGGTGCCATGATGAGTGT
GGACGAAACGCTAATGTGTTCTTTTCAGATTTTAAAGCCTGCGGAGAAAAAGAAGCCAAATGCCACGAGACCTGTAACAC
CTCCAAGGGGTATGATCACAAAGCAAGCAAAGAAATAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 28 .10 RPM
SRP021940_cerebellum 96 .07 RPM
SRP021940_embryo 53 .93 RPM
SRP021940_placental_villous 59 .13 RPM
SRP021940_synovial_membrane 36 .87 RPM
SRP021940_testis 153 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013861 ortholog_one2one 1 retrogene
retro_amel_1721,
Bos taurus ENSBTAG00000011198 ortholog_one2one 2 retrogenes
retro_btau_6, retro_btau_960,
Ciona intestinalis ENSCING00000004542 ortholog_many2many 1 retrogene
retro_cint_3,
Callithrix jacchus ENSCJAG00000009147 ortholog_one2one 7 retrogenes
retro_cjac_1062, retro_cjac_1165, retro_cjac_1408, retro_cjac_2304, retro_cjac_2535, retro_cjac_3288, retro_cjac_822,
Echinops telfairi ENSETEG00000015721 possible_ortholog 1 retrogene
retro_etel_2065,
Myotis lucifugus ENSMLUG00000010661 ortholog_one2one 2 retrogenes
retro_mluc_15, retro_mluc_2217,
Mus musculus ENSMUSG00000004455 ortholog_one2one 5 retrogenes
retro_mmus_2274, retro_mmus_2968, retro_mmus_3418, retro_mmus_851, retro_mmus_925,
Sorex araneus ENSSARG00000000571 possible_ortholog 1 retrogene
retro_sara_700,
Drosophila melanogaster FBgn0003134 ortholog_many2many 5 retrogenes
retro_dmel_21, retro_dmel_37, retro_dmel_42, retro_dmel_48, retro_dmel_81,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_853 87.12 96.07
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Download FASTA sequences of all ENSECAG00000017228 retrocopies