Parental gene: | Ppp1cc, ENSMUSG00000004455 |
| Aliases: | Ppp1cc, PP-1G, PP1, dis2m1 |
| Description: | protein phosphatase 1, catalytic subunit, gamma isoform [Source:MGI Symbol;Acc:MGI:104872] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 5:122158277..122175273(+) |
>ENSMUSG00000004455
ATGGCGGATATCGACAAACTCAACATCGACAGCATCATCCAACGGCTGCTGGAAGTGAGAGGGTCCAAGCCAGGCAAGAA
TGTCCAGCTCCAGGAGAACGAGATCCGAGGACTCTGCCTGAAGTCTCGGGAGATCTTCCTCAGTCAGCCTATCCTTTTAG
AACTTGAAGCACCACTCAAGATATGTGGTGACATCCACGGGCAGTACTATGATTTGCTCCGTCTGTTTGAATACGGTGGC
TTTCCTCCAGAGAGCAACTATTTGTTTCTCGGGGACTATGTGGACAGGGGCAAGCAGTCCCTGGAGACAATCTGCCTCTT
GCTGGCCTACAAAATCAAGTATCCGGAGAACTTCTTTCTTCTCAGAGGGAACCACGAGTGCGCCAGCATCAATAGGATCT
ACGGATTTTATGATGAGTGTAAAAGAAGATACAACATTAAGCTGTGGAAAACGTTCACAGACTGTTTTAACTGCTTGCCG
ATAGCAGCCATCGTGGACGAGAAGATATTCTGCTGTCATGGAGGTTTATCACCAGATCTTCAATCTATGGAGCAGATTCG
GCGAATTATGAGACCAACTGATGTACCAGATCAAGGTCTTCTTTGTGATCTTTTGTGGTCTGACCCCGATAAAGATGTCT
TAGGCTGGGGTGAAAATGACAGAGGAGTGTCCTTCACATTTGGTGCAGAAGTGGTTGCAAAATTTCTCCATAAGCATGAT
TTGGATCTTATATGTAGAGCCCATCAGGTGGTTGAAGATGGCTATGAGTTTTTTGCAAAGAGGCAGTTAGTCACTCTGTT
TTCTGCACCCAACTACTGTGGCGAGTTTGACAATGCAGGCGCCATGATGAGTGTGGATGAGACCCTCATGTGTTCCTTCC
AGATTTTAAAGCCTGCAGAGAAAAAGAAGCCCAACGCCACGAGACCTGTCACACCACCACGGGGTATGATCACAAAGCAA
GCAAAGAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 28 .99 RPM |
| SRP007412_cerebellum | 40 .08 RPM |
| SRP007412_heart | 17 .50 RPM |
| SRP007412_kidney | 24 .10 RPM |
| SRP007412_liver | 11 .96 RPM |
| SRP007412_testis | 147 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013861 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000011198 | ortholog_one2one | 2 retrogenes | |
| Ciona intestinalis | ENSCING00000004542 | ortholog_many2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009147 | ortholog_one2one | 7 retrogenes | |
| Equus caballus | ENSECAG00000017228 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000015721 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010661 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000000571 | possible_ortholog | 1 retrogene | |
| Drosophila melanogaster | FBgn0003134 | ortholog_many2many | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_851 | 95.06 | 100.00 | Please wait, loading  |
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| 2. | retro_mmus_925 | 93.21 | 100.00 | Please wait, loading |
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| 3. | retro_mmus_2274 | 83.33 | 77.09 | Please wait, loading |
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| 4. | retro_mmus_2968 | 100.00 | 100.00 | Please wait, loading |
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| 5. | retro_mmus_3418 | 84.27 | 81.73 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000004455 retrocopies