Parental gene:

DDX43, ENSECAG00000017971

Aliases:None
Description:DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:HGNC Symbol;Acc:18677]
Organism:Horse (Equus caballus)
Coordinates:10:28291022..28304336(+)


>ENSECAG00000017971
GGTCATGGTGGATCAAAAATAAGAGACATCCAAAGTACAACAAACACCAAAATACAAATAATAAAAGGGTATCCCGAAGC
AGAAGTCAAAATTTTTGGCAGCAAGATGATGCAGACAAAAGCAAAAGCCGTGATAGATAATCTTGTTAAAAAACAAGAAA
ATTATAATTCAGAACCCAGAGTTGATATCGTTGCACTCCACCCTTCTGCTGGAAGGGGTGTAAGGGCAAATGTCAGTGTT
GTCACGGAAGATCAGCCATTGATTGACTGGGATCAAATTCGAGAAGAAGGTTTGAAATGGGAAAAAAAAAAGTGGGCAGA
TTTGCCTCTAATTAAGAAAAACTTTTACATGGAGTCAGAAACAACAAGTTCAATGTCACAAATGCAAGTAGACAATTGGA
GGAAGGAAAATTATAATATAATGTGTGATGACCTGAAAGGTGGTGAGAAACGCCCTATCCCCAACCCCACATGTCAATTT
GAGGATGCCTTTCAGTGTTATCCTGAAGTTATGGAAAACATTCAAAAGGCAGGTTTTCAAAAGCCAACACCAATTCAGTC
ACAGGCCTGGCCAATAGTTCTACAAGGAATAGATCTTATCGGAGTAGCCCAAACTGGAACAGGGAAGACACTGTCCTACT
TAATGCCTGGGTTTATCCATCTGGACTCTCAACCAATAGCTAGAGAAAAAAGGAATGGACCTGGCATGTTAGTCCTCACA
CCCACTCGAGAATTAGCTCTTCAAGTGGAAGCTGAATGTTCTAAGTATTCTTATAAAGGTCTTAAAAGTGTTTGTATATA
TGGTGGTGGAGATAGAAATGGACAAATACAAGACCTGACAAAAGGTGTAGATATCATTATTGCAACTCCAGGAAGATTGA
ACGATCTGCAAATGAATAACTTTGTGAACCTGAAAAGTGTAACCTACTTGGTATTAGATGAAGCCGACAAGATGCTGGAC
ATGGGATTTGAACCCCAGATAATGAAGATTTTGTTGGATGTGCGCCCAGACAGGCAGACTGTTATGACAAGTGCAACGTG
GCCATATTCTGTCCGTCGACTCGCACAATCTTATTTGAAAGAGCCAATGATTGTATATGTTGGTACTCTGGACCTAGTTG
CTGTGAGTACCGTGAAGCAGAATATAATTGTCACCACAGAAGAAGAGAAACGATCTCACATCCAGACTTTCCTAGAGAGC
ATGTCTCCCAAAGACAAAGTCATAGTGTTTGTCAGCAGAAAAGCTGTTGCTGATCACTTATCAAGTGACCTCATTCTCCA
ACATATATCAGTGGAGTCTCTGCACGGCAACAGAGAGCAAAGCGATCGAGAGAGAGCATTAGAAAACTTTAAAACAGGTA
AAGTGAGAATACTGATTGCTACTGACTTAGCATCTCGAGGGCTTGACGTGCATGATGTCACACATGTCTATAATTATGAT
TTTCCCCGGAACATTGAAGAATATGTGCACAGGGTAGGGCGCACTGGAAGGGCAGGGAGAACTGGAGTGTCAATTACCCT
TCTCACTAGAAATGATTGGAGAGTTGCCAATGAATTAATTAATATTCTGGAAAGAGCAAATCAGAGTATCCCAGAGGACC
TTGTGTCAATGGCTGAAAGATACAAAGCAAATAAACTGAAAAAAGAAATGGAAAAAAAGTTGGGAAGACCCCAAGGAAAA
CCCAAGAAGTTTTATTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 0 .00 RPM
SRP021940_cerebellum 0 .00 RPM
SRP021940_embryo 0 .43 RPM
SRP021940_placental_villous 0 .43 RPM
SRP021940_synovial_membrane 0 .44 RPM
SRP021940_testis 24 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007851 ortholog_one2one 1 retrogene
retro_amel_31,
Callithrix jacchus ENSCJAG00000009966 ortholog_one2one 2 retrogenes
retro_cjac_3639, retro_cjac_3640,
Felis catus ENSFCAG00000031631 ortholog_one2one 1 retrogene
retro_fcat_583,
Homo sapiens ENSG00000080007 ortholog_one2one 1 retrogene
retro_hsap_76,
Gorilla gorilla ENSGGOG00000016092 ortholog_one2one 1 retrogene
retro_ggor_2889,
Microcebus murinus ENSMICG00000017145 ortholog_one2one 1 retrogene
retro_mmur_1603,
Monodelphis domestica ENSMODG00000018546 ortholog_many2many 1 retrogene
retro_mdom_14,
Mustela putorius furo ENSMPUG00000004342 ortholog_one2one 1 retrogene
retro_mputfur_47,
Nomascus leucogenys ENSNLEG00000001209 ortholog_one2one 1 retrogene
retro_nleu_1094,
Oryctolagus cuniculus ENSOCUG00000006338 ortholog_one2many 2 retrogenes
retro_ocun_1061, retro_ocun_227,
Otolemur garnettii ENSOGAG00000013660 ortholog_one2one 1 retrogene
retro_ogar_227,
Procavia capensis ENSPCAG00000005962 ortholog_one2one 1 retrogene
retro_pcap_151,
Pongo abelii ENSPPYG00000016774 ortholog_one2one 1 retrogene
retro_pabe_39,
Pan troglodytes ENSPTRG00000018344 ortholog_one2one 1 retrogene
retro_ptro_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_7 74.20 100.00
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Download FASTA sequences of all ENSECAG00000017971 retrocopies