Parental gene:

EIF4E1B, ENSEEUG00000005920

Aliases:None
Description:eukaryotic translation initiation factor 4E family member 1B [Source:HGNC Symbol;Acc:33179]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:scaffold_230457:3232..5021(-)


>ENSEEUG00000005920
CGAGGGTACTGGGGGCTCTCTGCTTTCTGCTGGTCACACACCCTCCCCAACAGCTGGGCTCTGTGGTTCTTCAAGAATGA
GCGCAGCCGGGCCTGGAGGGAGAACCTGCAGATGGTCACCAGGTTTGACACGGTGGAGGACTTCTGGGCGTTGTACAACA
ACATCAAGCTGCCCAGCAAGCTCTCCCCGGGTTGCGACTATGCCCTGTTCCGGGATGGCATCGAACCCATGTGGGAAGAC
AGCAGCAATAAGCGGGGTGGCCGCTGGCTGGTGAGCCTGGCCAAGCAGCTGCGCCACTTGGATCTGGACCGCCTGTGGTT
GGACACGATGCTGTGTCTGATCGGGGAGGGCTTTGGGGACTATGGCCCAGACGTGTGCGGGGCTGTTGTCAACATCCGCA
CCAAGGGAGACAAGATCGCGTTGTGGACGCGGGAGGCCGACAGCCAGGCCAGCGTGATGCACATCGGGCGAGTCTACAAA
GAATGCCTGGGTCTCTCCATGAAGGCCACCATTGGGTACCAGGCCCACGCAGACACGGCCACCAAGAGCAACTCACTGGC
TAGGAACAAGTTTGTGGTCTAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .00 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_brain 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003103 ortholog_one2one 1 retrogene
retro_btau_1679,
Erinaceus europaeus ENSEEUG00000015153 within_species_paralog 2 retrogenes
retro_eeur_57, retro_eeur_668,
Loxodonta africana ENSLAFG00000027919 ortholog_one2one 1 retrogene
retro_lafr_866,
Monodelphis domestica ENSMODG00000005097 ortholog_one2many 3 retrogenes
retro_mdom_1779, retro_mdom_47, retro_mdom_710,
Mus musculus ENSMUSG00000074895 ortholog_one2one 1 retrogene
retro_mmus_510,
Nomascus leucogenys ENSNLEG00000012532 ortholog_one2one 1 retrogene
retro_nleu_84,
Ochotona princeps ENSOPRG00000008875 ortholog_one2one 2 retrogenes
retro_opri_1088, retro_opri_21,
Tupaia belangeri ENSTBEG00000001631 ortholog_one2one 2 retrogenes
retro_tbel_3164, retro_tbel_3690,
Drosophila melanogaster FBgn0035709 ortholog_one2many 1 retrogene
retro_dmel_68,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_414 83.43 89.64
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Download FASTA sequences of all ENSEEUG00000005920 retrocopies