Parental gene:

NAP1L1, ENSFCAG00000000279

Aliases:None
Description:nucleosome assembly protein 1-like 1 [Source:HGNC Symbol;Acc:7637]
Organism:Cat (Felis catus)
Coordinates:B4:102074340..102091602(-)


>ENSFCAG00000000279
AAACCAGATATTAAAATCAAAGAACAGTCTGAACTTGATCAAGATTTGGATGATGTTGAAGAAGTAGAAGAAGAAGAAAC
TGGTGAAGAAACAAAAATCAAAGCGCGTCAGCTGACTGTTCAGATGATGCAAAATCCTCAGATTCTTGCAGCCCTTCAAG
AAAGACTTGATGGTCTGGTAGAAACACCAACAGGATACATTGAAAGCTTGCCTAGGGTAGTTAAGAGACGAGTGAATGCT
CTCAAAAACCTTCAAGTTAAATGTGCACAGATAGAAGCCAAATTCTATGAGGAAGTTCATGATCTTGAAAGAAAGTATGC
TGTTCTCTATCAGCCTCTATTTGATAAGCGATTTGAGATCATTAATGCAATTTATGAACCTACAGAAGAGGAATGTGAAT
GGAAACCAGATGAGGAGGATGAAATTTCGGAGGAGCTGAAAGAAAAAGCCAAGATTGAAGATGAGAAAAAAGATGAAGAA
AAAGAAGACCCCAAGGGAATTCCTGAATTCTGGTTGACCGTTTTTAAGAATGTTGACTTGCTCAGTGATATGGTTCAGGA
ACATGATGAACCTATTCTGAAGCACTTAAAAGATATTAAAGTGAAGTTCTCAGATGCTGGCCAGCCCATGAGTTTTGTCT
TAGAATTTCACTTTGAACCCAATGAATATTTCACAAATGAAGTGTTGACAAAGACATACAGGATGAGGTCAGAACCAGAT
GACTCTGATCCCTTTTCTTTTGATGGACCAGAAATTATGGGTTGTACAGGGTGCCAGATAGATTGGAAAAAAGGAAAGAA
TGTCACTTTGAAAACCATTAAGAAGAAGCAGAAACACAAGGGACGTGGGACAGTTCGTACTGTGACCAAAACAGTTTCCA
ACGACTCTTTCTTTAATTTTTTTGCCCCTCCTGAAGTTCCCGAGAGTGGAGACCTGGATGATGATGCTGAAGCTATCCTT
GCTGCAGACTTTGAAATTGGTCACTTTTTACGTGAGCGTATAATCCCAAGATCAGTGTTATACTTTACTGGAGAAGCTAT
TGAAGACGATGATGATGATTATGATGAAGAAGGTGAAGAAGCGGATGAGGAAGGGGAAGAAGAAGGAGATGAGGAAAATG
ATCCAGACTATGACTCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAGCAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 147 .71 RPM
SRP017611_kidney 126 .55 RPM
SRP017611_liver 43 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020908 possible_ortholog 8 retrogenes
retro_btau_1319, retro_btau_1324, retro_btau_1462, retro_btau_1487, retro_btau_474, retro_btau_652, retro_btau_70, retro_btau_935,
Callithrix jacchus ENSCJAG00000001115 ortholog_one2one 1 retrogene
retro_cjac_534,
Homo sapiens ENSG00000187109 ortholog_one2one 3 retrogenes
retro_hsap_1199, retro_hsap_2696, retro_hsap_833,
Gorilla gorilla ENSGGOG00000003883 ortholog_one2one 3 retrogenes
retro_ggor_1879, retro_ggor_686, retro_ggor_934,
Macropus eugenii ENSMEUG00000013702 ortholog_one2one 2 retrogenes
retro_meug_1031, retro_meug_604,
Macaca mulatta ENSMMUG00000015583 possible_ortholog 1 retrogene
retro_mmul_233,
Monodelphis domestica ENSMODG00000020456 ortholog_one2many 4 retrogenes
retro_mdom_1476, retro_mdom_1638, retro_mdom_520, retro_mdom_724,
Mustela putorius furo ENSMPUG00000017474 ortholog_one2one 1 retrogene
retro_mputfur_505,
Mus musculus ENSMUSG00000058799 possible_ortholog 1 retrogene
retro_mmus_263,
Nomascus leucogenys ENSNLEG00000004682 ortholog_one2one 4 retrogenes
retro_nleu_1192, retro_nleu_2085, retro_nleu_265, retro_nleu_2766,
Otolemur garnettii ENSOGAG00000010319 ortholog_one2one 4 retrogenes
retro_ogar_1278, retro_ogar_1281, retro_ogar_3357, retro_ogar_666,
Pan troglodytes ENSPTRG00000005240 ortholog_one2one 4 retrogenes
retro_ptro_1820, retro_ptro_582, retro_ptro_694, retro_ptro_819,
Rattus norvegicus ENSRNOG00000003890 possible_ortholog 1 retrogene
retro_rnor_150,
Vicugna pacos ENSVPAG00000007290 ortholog_one2one 3 retrogenes
retro_vpac_435, retro_vpac_441, retro_vpac_601,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1037 75.28 68.29
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Download FASTA sequences of all ENSFCAG00000000279 retrocopies