Parental gene:

NAP1L1, ENSG00000187109

Aliases:NAP1L1, NAP1, NAP1L, NRP
Description:nucleosome assembly protein 1-like 1 [Source:HGNC Symbol;Acc:7637]
Organism:Human (Homo sapiens)
Coordinates:12:76438669..76478813(-)


>ENSG00000187109
ATGGCAGACATTGACAACAAAGAACAGTCTGAACTTGATCAAGATTTGGATGATGTTGAAGAAGTAGAAGAAGAGGAAAC
TGGTGAAGAAACAAAACTCAAAGCACGTCAGCTAACTGTTCAGATGATGCAAAATCCTCAGATTCTTGCAGCCCTTCAAG
AAAGACTTGATGGTCTGGTAGAAACACCAACAGGATACATTGAAAGCCTGCCTAGGGTAGTTAAAAGACGAGTGAATGCT
CTCAAAAACCTGCAAGTTAAATGTGCACAGATAGAAGCCAAATTCTATGAGGAAGTTCACGATCTTGAAAGGAAGTATGC
TGTTCTCTATCAGCCTCTATTTGATAAGCGATTTGAAATTATTAATGCAATTTATGAACCTACGGAAGAAGAATGTGAAT
GGAAACCAGATGAAGAAGATGAGATTTCGGAGGAATTGAAAGAAAAGGCCAAGATTGAAGATGAGAAAAAAGATGAAGAA
AAAGAAGACCCCAAAGGAATTCCTGAATTTTGGTTAACTGTTTTTAAGAATGTTGACTTGCTCAGTGATATGGTTCAGGA
ACACGATGAACCTATTCTGAAGCACTTGAAAGATATTAAAGTGAAGTTCTCAGATGCTGGCCAGCCTATGAGTTTTGTCT
TAGAATTTCACTTTGAACCCAATGAATATTTTACAAATGAAGTGCTGACAAAGACATACAGGATGAGGTCAGAACCAGAT
GATTCTGATCCCTTTTCTTTTGATGGACCAGAAATTATGGGTTGTACAGGGTGCCAGATAGATTGGAAAAAAGGAAAGAA
TGTCACTTTGAAAACTATTAAGAAGAAGCAGAAACACAAGGGACGTGGGACAGTTCGTACTGTGACTAAAACAGTTTCCA
ATGACTCTTTCTTTAACTTTTTTGCCCCTCCTGAAGTTCCTGAGAGTGGAGATCTGGATGATGATGCTGAAGCTATCCTT
GCTGCAGACTTCGAAATTGGTCACTTTTTACGTGAGCGTATAATCCCAAGATCAGTGTTATATTTTACTGGAGAAGCTAT
TGAAGATGATGATGATGATTATGATGAAGAAGGTGAAGAAGCGGATGAGGAAGGGGAAGAAGAAGGAGATGAGGAAAATG
ATCCAGACTATGACCCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAGCAGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 622 .28 RPM
bodymap2_adrenal 504 .31 RPM
bodymap2_brain 437 .32 RPM
bodymap2_breast 362 .05 RPM
bodymap2_colon 672 .08 RPM
bodymap2_heart 253 .43 RPM
bodymap2_kidney 246 .02 RPM
bodymap2_liver 51 .27 RPM
bodymap2_lung 508 .09 RPM
bodymap2_lymph_node 519 .96 RPM
bodymap2_ovary 1239 .96 RPM
bodymap2_prostate 612 .85 RPM
bodymap2_skeletal_muscle 810 .63 RPM
bodymap2_testis 534 .15 RPM
bodymap2_thyroid 410 .84 RPM
bodymap2_white_blood_cells 739 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020908 possible_ortholog 8 retrogenes
retro_btau_1319, retro_btau_1324, retro_btau_1462, retro_btau_1487, retro_btau_474, retro_btau_652, retro_btau_70, retro_btau_935,
Callithrix jacchus ENSCJAG00000001115 ortholog_one2one 1 retrogene
retro_cjac_534,
Felis catus ENSFCAG00000000279 ortholog_one2one 1 retrogene
retro_fcat_1037,
Homo sapiens ENSG00000205531 within_species_paralog 1 retrogene
retro_hsap_438,
Gorilla gorilla ENSGGOG00000003883 ortholog_one2one 3 retrogenes
retro_ggor_1879, retro_ggor_686, retro_ggor_934,
Macropus eugenii ENSMEUG00000013702 ortholog_one2one 2 retrogenes
retro_meug_1031, retro_meug_604,
Macaca mulatta ENSMMUG00000015583 possible_ortholog 1 retrogene
retro_mmul_233,
Monodelphis domestica ENSMODG00000020456 ortholog_one2many 4 retrogenes
retro_mdom_1476, retro_mdom_1638, retro_mdom_520, retro_mdom_724,
Mustela putorius furo ENSMPUG00000017474 ortholog_one2one 1 retrogene
retro_mputfur_505,
Mus musculus ENSMUSG00000058799 possible_ortholog 1 retrogene
retro_mmus_263,
Nomascus leucogenys ENSNLEG00000004682 ortholog_one2one 4 retrogenes
retro_nleu_1192, retro_nleu_2085, retro_nleu_265, retro_nleu_2766,
Otolemur garnettii ENSOGAG00000010319 ortholog_one2one 4 retrogenes
retro_ogar_1278, retro_ogar_1281, retro_ogar_3357, retro_ogar_666,
Pan troglodytes ENSPTRG00000005240 ortholog_one2one 4 retrogenes
retro_ptro_1820, retro_ptro_582, retro_ptro_694, retro_ptro_819,
Rattus norvegicus ENSRNOG00000003890 possible_ortholog 1 retrogene
retro_rnor_150,
Vicugna pacos ENSVPAG00000007290 ortholog_one2one 3 retrogenes
retro_vpac_435, retro_vpac_441, retro_vpac_601,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_833 87.76 86.54
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2. retro_hsap_1199 83.94 98.21
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3. retro_hsap_2696 83.06 61.64
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Download FASTA sequences of all ENSG00000187109 retrocopies