Parental gene:

PKM, ENSFCAG00000000653

Aliases:None
Description:Pyruvate kinase isozyme M1/M2 [Source:UniProtKB/Swiss-Prot;Acc:P11979]
Organism:Cat (Felis catus)
Coordinates:B3:35713881..35729188(+)


>ENSFCAG00000000653
ATGTCAAAGCCCCATAGTGATGTCGGGACTGCCTTCATTCAGACCCAGCAGCTGCACGCAGCCATGGCTGACACGTTCTT
GGAGCACATGTGCCGCCTGGACATTGACTCGCCACCCATCACGGCCCGTAACACGGGCATCATCTGTACCATCGGTCCGG
CTTCCCGATCTGTGGAGATATTGAAAGAGATGATTAAATCTGGAATGAATGTGGCTCGTCTGAACTTCTCTCATGGAACT
CATGAGTACCATGCTGAGACCATCAAGAATGTGCGTGCAGCCACGGAAAGCTTTGCTTCTGACCCCATTCGTTACCGGCC
AGTTGCTGTGGCCCTGGACACCAAAGGACCTGAGATCCGAACTGGGCTCATCAAGGGCAGTGGCACCGCAGAGGTGGAGC
TGAAGAAAGGAGCCACTCTCAAGATCACCTTGGACAATGCCTACATGGAAAAATGCGATGAGAACGTCCTGTGGCTGGAC
TACAAGAACATTTGCAAGGTGGTGGAAGTGGGCAGCAAGGTCTACGTGGACGATGGGCTTATCTCTCTGTTGGTGAAGGA
GAAAGGTGCTGACTTCCTGGTGACAGAGGTGGAGAATGGTGGCTCCCTGGGGAGCAAGAAGGGTGTGAACCTTCCTGGGG
CTGCTGTGGACTTGCCTGCTGTGTCAGAAAAGGACATCCAGGATCTGAAATTTGGGGTAGAGCAGGATGTAGATATGGTG
TTTGCATCTTTCATCCGCAAGGCATCTGATGTCCATGAAGTTAGAAAGGTCCTGGGAGAAAAAGGAAAGAACATCAAGAT
AATCAGCAAAATTGAGAATCATGAGGGAGTTCGGAGGTTTGATGAAATCCTGGAAGCCAGCGATGGGATCATGGTGGCTC
GTGGTGATCTAGGCATTGAGATTCCTGCAGAGAAGGTCTTCCTTGCTCAGAAGATGATGATTGGGAGGTGCAACCGAGCT
GGGAAGCCTGTCATCTGTGCGACGCAGATGCTGGAGAGCATGATCAAGAAGCCCCGTCCCACCAGGGCTGAGGGCAGTGA
TGTGGCCAATGCGGTCTTGGATGGAGCCGACTGTATCATGCTTTCTGGAGAGACCGCCAAAGGGGACTACCCCCTGGAGG
CTGTTCGCATGCAGCACCTGATAGCTCGTGAGGCTGAGGCAGCCATGTTCCACCGCAAGCTGTTTGAAGAACTTGTGCGA
GGCTCAAGCCACTCCACAGACCTCATGGAAGCCATGGCCATGGGCAGCGTGGAGGCTTCTTATAAGTGTTTAGCAGCAGC
TTTGATAGTTCTGACGGAGTCTGGCAGGTCTGCTCACCAGGTGGCCAGATACCGCCCCCGCGCCCCCATCATTGCTGTGA
CTCGGAATCACCAGACTGCCCGCCAGGCCCACCTGTACCGCGGCATCTTCCCTGTGGTGTGTAAGGACCCAGTGCAGGAG
GCCTGGGCTGAGGATGTGGACCTTCGAGTGAACTTGGCCATGAATGTTGGCAAGGCCCGAGGCTTCTTCAAGAAGGGAGA
TGTGGTCATTGTGCTGACCGGGTGGCGCCCTGGCTCCGGCTTCACCAATACCATGCGTGTAGTGCCTGTGCCATGA

Library Parental gene expression (RPM)
SRP017611_brain 417 .66 RPM
SRP017611_kidney 68 .84 RPM
SRP017611_liver 10 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013504 ortholog_one2many 1 retrogene
retro_chof_1430,
Callithrix jacchus ENSCJAG00000018473 possible_ortholog 1 retrogene
retro_cjac_236,
Homo sapiens ENSG00000067225 possible_ortholog 2 retrogenes
retro_hsap_210, retro_hsap_3418,
Gorilla gorilla ENSGGOG00000005062 possible_ortholog 1 retrogene
retro_ggor_281,
Macropus eugenii ENSMEUG00000004506 ortholog_one2many 3 retrogenes
retro_meug_1482, retro_meug_2043, retro_meug_912,
Macaca mulatta ENSMMUG00000023454 possible_ortholog 1 retrogene
retro_mmul_183,
Mus musculus ENSMUSG00000032294 possible_ortholog 8 retrogenes
retro_mmus_1402, retro_mmus_1678, retro_mmus_1754, retro_mmus_2065, retro_mmus_2066, retro_mmus_2636, retro_mmus_3509, retro_mmus_854,
Nomascus leucogenys ENSNLEG00000013869 possible_ortholog 3 retrogenes
retro_nleu_1859, retro_nleu_2319, retro_nleu_2716,
Pongo abelii ENSPPYG00000006613 possible_ortholog 3 retrogenes
retro_pabe_2834, retro_pabe_3645, retro_pabe_429,
Pan troglodytes ENSPTRG00000007246 possible_ortholog 2 retrogenes
retro_ptro_2322, retro_ptro_335,
Rattus norvegicus ENSRNOG00000011329 possible_ortholog 6 retrogenes
retro_rnor_1120, retro_rnor_2050, retro_rnor_2253, retro_rnor_2703, retro_rnor_515, retro_rnor_830,
Sarcophilus harrisii ENSSHAG00000010300 ortholog_many2many 1 retrogene
retro_shar_90,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_105 94.35 100.00
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Download FASTA sequences of all ENSFCAG00000000653 retrocopies