Parental gene:

ENSSHAG00000010300

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL834451.1:664340..678637(+)


>ENSSHAG00000010300
GTGAGCAAAACAGCCAGTGAATTAGCATGCACAACTATTCAGAACCAGCAGCTGTTTGCTGCCATGGCCGACACCTTTCT
GGAACATATGTGTCGTTTGGATATCGATTCGGAGCCCACCGTTGCCCGAAACACTGGAATCATCTGCACCATTGGCCCAG
CCTCCCGATCTGTGGACAAGCTAAAAGAAATGATAGCAGCTGGAATGAATGTGGCCCGTCTAAATTTCTCCCATGGAACT
CATGAGTACCATGCAGAAACTATCAAAAATGTGCGCACAGCTACAGAAAACTTTACTTCTGATCCTGTTTATTACCGTCC
CATTGCTATAGCCTTGGACACCAAAGGACCAGAAATCCGGACTGGACTCATCAAGGGTAGTGGCACGGCTGAAGTGGAGC
TAAAGAAGGGCAATACACTCAAAGTAACTTTGGATAATGCCTATATGGAGAAATGTGATGAAAATATCCTGTGGGTAGAC
TACAAAAACATTTGCAAGGTAGTGGACGTTGGTGGCAAAATCTTTGTGGACGATGGGCTCATTTCTCTTCTTGTGAAGGA
AAAAGTAGGTCAGGATTTCCTTATAACTGAAGTGGAGAATGGTGGTATGCTGGGCAGCAAGAAGGGTGTGAACCTTCCCG
GGGCAGCTGTAGACTTGCCTGCTGTATCTCAGAAGGATATCCAAGATCTACAGTTTGGATTAGAGCAAGGAGTGGATATG
ATATTTGCATCTTTCATCCGAAAGGCTGCTGATGTTCATGCAGTCAGAGAGGTCCTGGGAGAAAAAGGAAGGAACATCAA
GATCATCAGCAAGATTGAAAACCATGAAGGAGTCCGAAGATTTGATGAGATCTTGGAAGCCAGTGATGGCATCATGGTTG
CTCGGGGTGACTTGGGTATTGAGATCCCAGCAGAAAAAGTCTTCCTTGCCCAGAAGATGATGATTGGAAGATGTAATCGA
GTTGGGAAACCTGTTATTTGTGCCACTCAGATGCTTGAGAGCATGATTAAGAAGCCACGCCCCACACGTGCTGAAGGTAG
TGATGTAGCCAATGCTGTTCTGGATGGAGCTGATTGTATCATGCTGTCTGGAGAGACTGCCAAAGGAGACTATCCAGTAG
AAGCTGTGCGGATGCAACACTTGATTGCCCGAGAGGCAGAGGCCGCCATCTATCACACGCAGTTGTTTGAGGAGCTTCGC
CGCCTAGCCCCTATAACCAAGGATCCCACTGAAGCTGCTGCCGTGGGTGCCGTAGAGGCTTCTTTCAAGTGTTGCAGTGG
GGCCATTATCGTCCTCACCAAGTCTGGAAGGTCTGCTCATCAGGTGGCCAGGTACCGTCCTAGGGCTCCCATCATAGCTG
TGACTCGTTGTGCTCAGGCTGCACGTCAGGCCCATCTTTATCGAGGTGTCTTCCCTGTGCTGTGCAAAGATGCTGTTCAT
GAATCATGGGCTGAAGATGTGGACCTCAGGGTTAATTTAGCCATGAAAGTTGGAAAAGCTCGAGGCTTTTTCAAGAAAGA
TGATGTGGTCATTGTTCTAAATGGTTGGCGTCCAGGTCCAGGCTTTACCAACACTATGCGGGTGCTGCCAGTGCCATAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013504 ortholog_one2many 1 retrogene
retro_chof_1430,
Callithrix jacchus ENSCJAG00000018473 ortholog_many2many 1 retrogene
retro_cjac_236,
Felis catus ENSFCAG00000000653 ortholog_many2many 1 retrogene
retro_fcat_105,
Homo sapiens ENSG00000067225 ortholog_one2many 2 retrogenes
retro_hsap_210, retro_hsap_3418,
Gorilla gorilla ENSGGOG00000005062 ortholog_many2many 1 retrogene
retro_ggor_281,
Macropus eugenii ENSMEUG00000004506 ortholog_one2many 3 retrogenes
retro_meug_1482, retro_meug_2043, retro_meug_912,
Macaca mulatta ENSMMUG00000023454 ortholog_many2many 1 retrogene
retro_mmul_183,
Mus musculus ENSMUSG00000032294 ortholog_one2many 8 retrogenes
retro_mmus_1402, retro_mmus_1678, retro_mmus_1754, retro_mmus_2065, retro_mmus_2066, retro_mmus_2636, retro_mmus_3509, retro_mmus_854,
Nomascus leucogenys ENSNLEG00000013869 ortholog_one2many 3 retrogenes
retro_nleu_1859, retro_nleu_2319, retro_nleu_2716,
Pongo abelii ENSPPYG00000006613 ortholog_one2many 3 retrogenes
retro_pabe_2834, retro_pabe_3645, retro_pabe_429,
Pan troglodytes ENSPTRG00000007246 ortholog_one2many 2 retrogenes
retro_ptro_2322, retro_ptro_335,
Rattus norvegicus ENSRNOG00000011329 ortholog_many2many 6 retrogenes
retro_rnor_1120, retro_rnor_2050, retro_rnor_2253, retro_rnor_2703, retro_rnor_515, retro_rnor_830,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_90 88.91 100.00
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Download FASTA sequences of all ENSSHAG00000010300 retrocopies