Parental gene:

VAMP4, ENSFCAG00000013371

Aliases:None
Description:vesicle-associated membrane protein 4 [Source:HGNC Symbol;Acc:12645]
Organism:Cat (Felis catus)
Coordinates:F1:13656973..13679940(-)


>ENSFCAG00000013371
ATGCCTCCCAAGTTCAAGCGCCACCTAAATGACGATGATGTCACTGGTTCTGTGAAAAGTGAAAGGAGAAATCTTTTGGA
AGATGACTCAGATGAAGAAGAAGACTTTTTTCTAAGGGGACCATCTGGACCAAGATTTGGACCTAGAAATGATAAAATTA
AGCATGTTCAGAATCAGGTGGATGAAGTTATTGATGTCATGCAAGAAAATATTACAAAGGTAATTGAAAGAGGGGAGAGA
CTAGATGAACTACAGGACAAATCAGAAAGCTTATCGGATAATGCAACTGCTTTTAGCAACAGATCGAAACAACTTCGAAG
GCAAATGTGGTGGCGTGGATGCAGAATAAAAGCCATCATGGCTTTGGTTGCTGTTACCCTTTTGCTAGTGATTATCATTC
TTATAGTCATGAAATACCGTACTTGA

Library Parental gene expression (RPM)
SRP017611_liver 6 .77 RPM
SRP017611_kidney 10 .31 RPM
SRP017611_brain 21 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016956 ortholog_one2one 1 retrogene
retro_amel_1457,
Macropus eugenii ENSMEUG00000011226 ortholog_one2one 13 retrogenes
retro_meug_1053, retro_meug_115, retro_meug_1257, retro_meug_1406, retro_meug_1489, retro_meug_1587, retro_meug_163, retro_meug_2075, retro_meug_2154, retro_meug_319, retro_meug_386, retro_meug_569, retro_meug_75,
Monodelphis domestica ENSMODG00000003811 ortholog_one2many 1 retrogene
retro_mdom_268,
Mustela putorius furo ENSMPUG00000015609 ortholog_one2one 1 retrogene
retro_mputfur_315,
Oryctolagus cuniculus ENSOCUG00000015967 ortholog_one2one 1 retrogene
retro_ocun_844,
Otolemur garnettii ENSOGAG00000026745 possible_ortholog 1 retrogene
retro_ogar_3369,
Pteropus vampyrus ENSPVAG00000014342 ortholog_one2one 1 retrogene
retro_pvam_97,
Sarcophilus harrisii ENSSHAG00000017179 ortholog_one2one 2 retrogenes
retro_shar_584, retro_shar_747,
Vicugna pacos ENSVPAG00000007424 ortholog_one2one 1 retrogene
retro_vpac_570,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1167 80.26 53.90
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000013371 retrocopies