Parental gene:

PSMC5, ENSG00000087191

Aliases:PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG
Description:proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Source:HGNC Symbol;Acc:9552]
Organism:Human (Homo sapiens)
Coordinates:17:61904511..61909379(+)


>ENSG00000087191
ATGGCGCTTGACGGACCAGAGCAGATGGAGCTGGAGGAGGGGAAGGCAGGCAGCGGACTCCGCCAATATTATCTGTCCAA
GATTGAAGAACTCCAGCTGATTGTGAATGATAAGAGCCAAAACCTCCGGAGGCTGCAGGCACAGAGGAACGAACTAAATG
CTAAAGTTCGCCTATTGCGGGAGGAGCTACAGCTGCTGCAGGAGCAGGGCTCCTATGTGGGGGAAGTAGTCCGGGCCATG
GATAAGAAGAAAGTGTTGGTCAAGGTACATCCTGAAGGTAAATTTGTTGTAGACGTGGACAAAAACATTGACATCAATGA
TGTGACACCCAATTGCCGGGTGGCTCTAAGGAATGACAGCTACACTCTGCACAAGATCCTGCCCAACAAGGTAGACCCAT
TAGTGTCACTGATGATGGTGGAGAAAGTACCAGATTCAACTTATGAGATGATTGGTGGACTGGACAAACAGATCAAGGAG
ATCAAAGAAGTGATCGAGCTGCCTGTTAAGCATCCTGAGCTCTTCGAAGCACTGGGCATTGCTCAGCCCAAGGGAGTGCT
GCTGTATGGACCTCCAGGCACTGGGAAGACACTGTTGGCCCGGGCTGTGGCTCATCATACGGACTGTACCTTTATTCGTG
TCTCTGGCTCTGAACTGGTACAGAAATTCATAGGGGAAGGGGCAAGAATGGTGAGGGAGCTGTTTGTCATGGCACGGGAA
CATGCTCCATCTATCATCTTCATGGACGAAATCGACTCCATCGGCTCCTCGCGGCTGGAGGGGGGTTCTGGAGGGGACAG
TGAAGTGCAGCGCACGATGCTGGAGTTGCTCAACCAGCTCGACGGCTTTGAGGCCACCAAGAACATCAAGGTTATCATGG
CTACTAATAGGATTGATATCCTGGACTCGGCACTGCTTCGCCCAGGGCGCATTGACAGAAAAATTGAATTCCCACCCCCC
AATGAGGAGGCCCGGCTGGACATTTTGAAGATTCATTCTCGGAAGATGAACCTGACCCGGGGGATCAACCTGAGAAAAAT
TGCTGAGCTCATGCCAGGAGCATCAGGGGCTGAAGTGAAGGGCGTGTGCACAGAAGCTGGCATGTATGCCCTGCGAGAAC
GGCGAGTCCATGTCACTCAGGAGGACTTTGAGATGGCAGTAGCCAAGGTCATGCAGAAGGACAGTGAGAAAAACATGTCC
ATCAAGAAATTATGGAAGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 114 .28 RPM
bodymap2_adrenal 122 .86 RPM
bodymap2_brain 128 .97 RPM
bodymap2_breast 87 .69 RPM
bodymap2_colon 130 .01 RPM
bodymap2_heart 52 .13 RPM
bodymap2_kidney 124 .50 RPM
bodymap2_liver 77 .54 RPM
bodymap2_lung 50 .62 RPM
bodymap2_lymph_node 85 .90 RPM
bodymap2_ovary 104 .85 RPM
bodymap2_prostate 113 .17 RPM
bodymap2_skeletal_muscle 170 .58 RPM
bodymap2_testis 146 .39 RPM
bodymap2_thyroid 136 .13 RPM
bodymap2_white_blood_cells 68 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000002393 ortholog_one2one 1 retrogene
retro_dnov_1508,
Gorilla gorilla ENSGGOG00000006803 ortholog_one2one 1 retrogene
retro_ggor_1418,
Macaca mulatta ENSMMUG00000016769 ortholog_one2one 1 retrogene
retro_mmul_1354,
Monodelphis domestica ENSMODG00000009873 ortholog_one2one 2 retrogenes
retro_mdom_1411, retro_mdom_1583,
Nomascus leucogenys ENSNLEG00000004150 ortholog_one2one 1 retrogene
retro_nleu_1480,
Oryctolagus cuniculus ENSOCUG00000004329 ortholog_one2many 1 retrogene
retro_ocun_78,
Otolemur garnettii ENSOGAG00000008296 ortholog_one2one 1 retrogene
retro_ogar_911,
Procavia capensis ENSPCAG00000002653 ortholog_one2one 1 retrogene
retro_pcap_352,
Pongo abelii ENSPPYG00000008533 ortholog_one2one 1 retrogene
retro_pabe_1606,
Pan troglodytes ENSPTRG00000009525 ortholog_one2one 1 retrogene
retro_ptro_1303,
Ictidomys tridecemlineatus ENSSTOG00000008945 ortholog_one2one 1 retrogene
retro_itri_1046,
Tupaia belangeri ENSTBEG00000010546 ortholog_one2one 3 retrogenes
retro_tbel_1411, retro_tbel_2422, retro_tbel_3450,
Tursiops truncatus ENSTTRG00000006984 ortholog_one2one 1 retrogene
retro_ttru_1532,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1949 75.42 57.88
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000087191 retrocopies