Parental gene:

PSMC5, ENSTBEG00000010546

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, ATPase, 5 [Source:HGNC Symbol;Acc:9552]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2525:222616..227526(+)


>ENSTBEG00000010546
ATGGCGCTTGACGGTCCAGAGCAGATGGAGCTGGAAGAGGGGAAGGCAGGCAGCGGACTCCGCCAGTATTACCTGTCCAA
GATTGAAGAACTCCAGCTGGTGGATAGCAACTGCGAGCTACAGCAAGTTCGCCTTTTGCGGGAAGAGCTGCAGCTGCTGC
AGGAACAGGGCTCCTATGTCGGGGAAGTGGTCCGGGCCATGGACAAGAAGAAGGTGCTGGTCAAGGTGCATCCTGAGGGA
AAGTTTGTCGTAGACGTGGACAAGAATATCGACATCAACGATGTGACACCCAATTGCCGGGTGGCTCTAAGAAATGACAG
CTACACTCTGCACAAGATCCTACCCAACAAGGTGGACCCACTGGTGTCACTGATGATGGTGGAGAAGGTGCCAGACTCAA
CCTACGAGATGATTGGTGGACTAGACAAGCAGATCAAAGAGATCAAAGAAGTGATCGAGCTGCCAGTCAAGCACCCTGAG
CTCTTTGAAGCACTGGGCATCGCACAGCCCAAGGGTGTGCTGCTGTATGGCCCCCCAGGCACTGGGAAGACACTGCTGGC
CCGAGCTGTGGCTCATCACACCGACTGCACCTTCATTCGTGTCTCTGGCTCTGAATTGGTACAGAAATTCATTGGTGAAG
GGGCAAGAATGGTGAGGGAACTGTTCGTCATGGCCCGAGAACACGCTCCATCTATCATCTTCATGGATGAAATCGACTCT
ATTGGCTCCTCCAGGCTGGAAGGGGGTTCAGGGGGTGACAGTGAGGTGCAGCGCACCATGCTAGAGCTTCTCAACCAGCT
GGATGGCTTTGAGGCCACCAAGAATATCAAGGTCATCATGGCTACCAACAGGATTGATATACTAGACTCGGCCCTGCTTC
GCCCGGGACGCATCGACAGGAAAATTGAATTCCCACCTCCCAATGAGGAGGCTCGGGACATTCTGAAGATCCATTCTCGG
AAAATGAACCTGACCCGGGGGATCAACCTGAGAAAATTTGCTGAGCTCATGCCAGGAGCATCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACTTCGAGATGGCAGTGG
CCAAGGTCATGCAAAAGGACAGTGAGAAAAACATGTCCATCAAGAAACTGTGGAAGTGA

Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000002393 ortholog_one2one 1 retrogene
retro_dnov_1508,
Homo sapiens ENSG00000087191 ortholog_one2one 1 retrogene
retro_hsap_1949,
Gorilla gorilla ENSGGOG00000006803 ortholog_one2one 1 retrogene
retro_ggor_1418,
Macaca mulatta ENSMMUG00000016769 ortholog_one2one 1 retrogene
retro_mmul_1354,
Monodelphis domestica ENSMODG00000009873 ortholog_one2one 2 retrogenes
retro_mdom_1411, retro_mdom_1583,
Nomascus leucogenys ENSNLEG00000004150 ortholog_one2one 1 retrogene
retro_nleu_1480,
Oryctolagus cuniculus ENSOCUG00000004329 ortholog_one2many 1 retrogene
retro_ocun_78,
Otolemur garnettii ENSOGAG00000008296 ortholog_one2one 1 retrogene
retro_ogar_911,
Procavia capensis ENSPCAG00000002653 ortholog_one2one 1 retrogene
retro_pcap_352,
Pongo abelii ENSPPYG00000008533 ortholog_one2many 1 retrogene
retro_pabe_1606,
Pan troglodytes ENSPTRG00000009525 ortholog_one2one 1 retrogene
retro_ptro_1303,
Ictidomys tridecemlineatus ENSSTOG00000008945 ortholog_one2one 1 retrogene
retro_itri_1046,
Tursiops truncatus ENSTTRG00000006984 ortholog_one2one 1 retrogene
retro_ttru_1532,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_1411 50.95 52.55
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2. retro_tbel_2422 52.78 54.59
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3. retro_tbel_3450 50.53 71.17
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Download FASTA sequences of all ENSTBEG00000010546 retrocopies