Parental gene: | ARL2BP, ENSG00000102931 |
| Aliases: | ARL2BP, BART, BART1, RP66 |
| Description: | ADP-ribosylation factor-like 2 binding protein [Source:HGNC Symbol;Acc:17146] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 16:57279009..57287516(+) |
>ENSG00000102931
ATGGACGCCTTAGAAGGAGAGAGCTTTGCGCTGTCTTTCTCCTCCGCCTCTGATGCAGAATTTGATGCTGTGGTTGGATA
TTTAGAGGACATTATCATGGATGACGAGTTCCAGTTATTACAGAGAAATTTCATGGACAAGTACTACCTGGAGTTTGAAG
ACACAGAAGAGAATAAACTCATCTACACACCTATTTTTAATGAATACATTTCTTTGGTAGAAAAATACATTGAAGAACAG
CTGCTGCAGCGGATTCCTGAGTTCAACATGGCAGCCTTCACCACAACATTACAGCACCATAAGGATGAAGTGGCTGGTGA
CATATTCGACATGCTGCTCACCTTCACAGATTTTCTGGCTTTTAAAGAAATGTTTTTGGACTACAGAGCAGAAAAAGAAG
GCCGAGGACTGGACTTAAGCAGTGGCTTAGTGGTGACTTCATTGTGCAAATCATCTTCTCTGCCAGCTTCCCAGAACAAT
CTGCGGCACTAG
ATGGACGCCTTAGAAGGAGAGAGCTTTGCGCTGTCTTTCTCCTCCGCCTCTGATGCAGAATTTGATGCTGTGGTTGGATA
TTTAGAGGACATTATCATGGATGACGAGTTCCAGTTATTACAGAGAAATTTCATGGACAAGTACTACCTGGAGTTTGAAG
ACACAGAAGAGAATAAACTCATCTACACACCTATTTTTAATGAATACATTTCTTTGGTAGAAAAATACATTGAAGAACAG
CTGCTGCAGCGGATTCCTGAGTTCAACATGGCAGCCTTCACCACAACATTACAGCACCATAAGGATGAAGTGGCTGGTGA
CATATTCGACATGCTGCTCACCTTCACAGATTTTCTGGCTTTTAAAGAAATGTTTTTGGACTACAGAGCAGAAAAAGAAG
GCCGAGGACTGGACTTAAGCAGTGGCTTAGTGGTGACTTCATTGTGCAAATCATCTTCTCTGCCAGCTTCCCAGAACAAT
CTGCGGCACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 17 .39 RPM |
| bodymap2_lung | 35 .13 RPM |
| bodymap2_breast | 76 .46 RPM |
| bodymap2_adipose | 60 .53 RPM |
| bodymap2_adrenal | 65 .42 RPM |
| bodymap2_skeletal_muscle | 26 .72 RPM |
| bodymap2_thyroid | 41 .69 RPM |
| bodymap2_prostate | 67 .01 RPM |
| bodymap2_colon | 55 .94 RPM |
| bodymap2_testis | 94 .36 RPM |
| bodymap2_brain | 55 .20 RPM |
| bodymap2_heart | 49 .62 RPM |
| bodymap2_white_blood_cells | 75 .17 RPM |
| bodymap2_lymph_node | 52 .12 RPM |
| bodymap2_ovary | 101 .65 RPM |
| bodymap2_kidney | 64 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012116 | ortholog_one2many | 9 retrogenes | |
| Cavia porcellus | ENSCPOG00000011406 | ortholog_one2one | 5 retrogenes | |
| Equus caballus | ENSECAG00000016621 | possible_ortholog | 3 retrogenes | |
| Felis catus | ENSFCAG00000002937 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005471 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000008633 | possible_ortholog | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000012467 | possible_ortholog | 6 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012680 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000020352 | ortholog_one2one | 7 retrogenes | |
| Monodelphis domestica | ENSMODG00000013511 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002803 | ortholog_one2one | 7 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000582 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000006931 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000007384 | ortholog_one2one | 8 retrogenes | |
| Pan troglodytes | ENSPTRG00000008150 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016991 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005442 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010254 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014441 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004923 | ortholog_one2many | 10 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_999 | 77.91 | 99.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1189 | 78.79 | 60.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1846 | 72.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_3237 | 78.86 | 74.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3263 | 60.61 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_3270 | 57.00 | 60.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_4293 | 74.40 | 75.46 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000102931 retrocopies