Parental gene:

CHCHD3, ENSG00000106554

Aliases:CHCHD3, MINOS3, PPP1R22
Description:coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:21906]
Organism:Human (Homo sapiens)
Coordinates:7:132469628..132766848(-)


>ENSG00000106554
ATGGGTGGGACCACCAGCACCCGCCGGGTCACCTTCGAGGCGGACGAGAATGAGAACATCACCGTGGTGAAGGGCATCCG
GCTTTCGGAAAATGTGATTGATCGAATGAAGGAATCCTCTCCATCTGGTTCGAAGTCTCAGCGGTATTCTGGTGCTTATG
GTGCCTCAGTTTCTGATGAAGAATTGAAAAGAAGAGTAGCTGAGGAGCTGGCATTGGAGCAAGCCAAGAAAGAATCCGAA
GATCAGAAACGACTAAAGCAAGCCAAAGAGCTGGACCGAGAGAGGGCTGCTGCCAATGAGCAGTTAACCAGAGCCATCCT
TCGGGAGAGGATATGTAGCGAGGAGGAACGCGCTAAGGCAAAGCACCTGGCTAGGCAGCTGGAAGAGAAAGACCGAGTGC
TAAAGAAGCAGGATGCATTCTACAAAGAACAGCTGGCTAGACTGGAGGAGAGGAGCTCAGAGTTCTACAGAGTCACCACT
GAACAATATCAGAAAGCTGCTGAAGAGGTGGAAGCAAAGTTCAAGCGATATGAGTCTCATCCAGTCTGTGCTGATCTGCA
GGCCAAAATTCTTCAGTGTTACCGTGAGAACACCCACCAGACCCTCAAATGCTCCGCTCTGGCCACCCAGTATATGCACT
GTGTCAATCATGCCAAACAGAGCATGCTTGAGAAGGGAGGATAA

Library Parental gene expression (RPM)
bodymap2_adipose 45 .60 RPM
bodymap2_adrenal 35 .78 RPM
bodymap2_brain 21 .71 RPM
bodymap2_breast 70 .97 RPM
bodymap2_colon 50 .04 RPM
bodymap2_heart 115 .31 RPM
bodymap2_kidney 53 .65 RPM
bodymap2_liver 18 .72 RPM
bodymap2_lung 23 .63 RPM
bodymap2_lymph_node 25 .99 RPM
bodymap2_ovary 45 .61 RPM
bodymap2_prostate 42 .75 RPM
bodymap2_skeletal_muscle 98 .63 RPM
bodymap2_testis 46 .98 RPM
bodymap2_thyroid 74 .89 RPM
bodymap2_white_blood_cells 26 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001312 ortholog_one2one 1 retrogene
retro_cfam_374,
Dasypus novemcinctus ENSDNOG00000004942 ortholog_one2one 1 retrogene
retro_dnov_2559,
Macaca mulatta ENSMMUG00000001671 ortholog_one2many 1 retrogene
retro_mmul_14,
Mus musculus ENSMUSG00000053768 ortholog_one2one 1 retrogene
retro_mmus_3452,
Nomascus leucogenys ENSNLEG00000012967 ortholog_one2one 3 retrogenes
retro_nleu_168, retro_nleu_716, retro_nleu_904,
Oryctolagus cuniculus ENSOCUG00000014032 ortholog_one2one 1 retrogene
retro_ocun_801,
Pongo abelii ENSPPYG00000025827 ortholog_one2one 5 retrogenes
retro_pabe_2492, retro_pabe_3161, retro_pabe_345, retro_pabe_411, retro_pabe_501,
Pan troglodytes ENSPTRG00000019711 ortholog_one2one 4 retrogenes
retro_ptro_2550, retro_ptro_282, retro_ptro_407, retro_ptro_701,
Rattus norvegicus ENSRNOG00000013211 ortholog_one2one 1 retrogene
retro_rnor_2874,
Sorex araneus ENSSARG00000012111 ortholog_one2one 1 retrogene
retro_sara_592,
Ictidomys tridecemlineatus ENSSTOG00000022282 ortholog_one2one 1 retrogene
retro_itri_1301,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_358 94.39 93.83
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2. retro_hsap_542 79.82 98.68
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3. retro_hsap_3759 61.72 55.07
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Download FASTA sequences of all ENSG00000106554 retrocopies