Parental gene:

Chchd3, ENSRNOG00000013211

Aliases:None
Description:coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial [Source:RefSeq peptide;Acc:NP_001100058]
Organism:Rat (Rattus norvegicus)
Coordinates:4:59822341..60099177(-)


>ENSRNOG00000013211
ATGGGCGGGACCGCTAGCACCCGCCGGGTCACCTTCGAGGCGGACGAGAACGAGAACATCACGGTGGTGAAGGGCATCCG
GCTGTCAGAGAATGTGATCGACCGGATGAAGGAGTCCTCTCCATCTGGCTCTAAGTCTCAGCGATATTCCAGTGTTTATG
GTGCTTCAGTTTCTGATGAAGAATTGAAAAGAAGAGTAGCCGAGGAGCTGGCATTGGAACAAGCCAAAATGGAGTCGGAA
AACCAGAGACGCCTTAAGCACGCCAGGGACCTAGAAAGAGAGAAAGCTGTGGCCAATGAGCAGCTGACCAGAGCTATCCT
TCAGGAAAGAATATCCAGTGAGGAGAACCGCACAAAGGTGAAGCATCTGGCTCGGCAGCTGGAAGAGAAAGATCGAATGA
TACGGAAGCAGGATGCGTTCTACAAAGAGCAGCTGTCCAGACTGGAGGAGAGGAGCTCAGAATTCTACAAAGTTACTACC
GAGGAATATCAGAAAGCTGCTGAAGAGGTGGAGTCCAAGTTCAGGCGGTATGAATATCATCCAGTCTGTGCAGATCTGCA
GACCAAAATCCTTCAGTGTTACCGTCAGAACACCCAGCAGACCCTCAGCTGCTCTGCTCTGGCCAACCAATACATGCACT
GTGTCAACCATGCCAAACAGAACATGCTGGAGAAGGGAGGCTAA

Library Parental gene expression (RPM)
SRP017611_brain 39 .11 RPM
SRP017611_kidney 92 .95 RPM
SRP017611_liver 34 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001312 ortholog_one2one 1 retrogene
retro_cfam_374,
Dasypus novemcinctus ENSDNOG00000004942 ortholog_one2one 1 retrogene
retro_dnov_2559,
Homo sapiens ENSG00000106554 ortholog_one2one 3 retrogenes
retro_hsap_358, retro_hsap_3759, retro_hsap_542,
Macaca mulatta ENSMMUG00000001671 ortholog_one2many 1 retrogene
retro_mmul_14,
Mus musculus ENSMUSG00000053768 ortholog_one2one 1 retrogene
retro_mmus_3452,
Nomascus leucogenys ENSNLEG00000012967 ortholog_one2one 3 retrogenes
retro_nleu_168, retro_nleu_716, retro_nleu_904,
Oryctolagus cuniculus ENSOCUG00000014032 ortholog_one2one 1 retrogene
retro_ocun_801,
Pongo abelii ENSPPYG00000025827 ortholog_one2one 5 retrogenes
retro_pabe_2492, retro_pabe_3161, retro_pabe_345, retro_pabe_411, retro_pabe_501,
Pan troglodytes ENSPTRG00000019711 ortholog_one2one 4 retrogenes
retro_ptro_2550, retro_ptro_282, retro_ptro_407, retro_ptro_701,
Sorex araneus ENSSARG00000012111 ortholog_one2one 1 retrogene
retro_sara_592,
Ictidomys tridecemlineatus ENSSTOG00000022282 ortholog_one2one 1 retrogene
retro_itri_1301,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2874 60.94 55.51
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Download FASTA sequences of all ENSRNOG00000013211 retrocopies