Parental gene:

SPCS1, ENSG00000114902

Aliases:SPCS1, SPC1, SPC12, YJR010C-A
Description:signal peptidase complex subunit 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23401]
Organism:Human (Homo sapiens)
Coordinates:3:52738970..52742182(+)


>ENSG00000114902
ATGGCGCGGGGCGGGGACACGGGCTGTACCGGCCCGTCGGAGACTTCCGCTTCCGGGGCCGCCGCCATCGCTCTCCCGGG
CTTAGAAGGCCCGGCTACTGACGCGCAGTGCCAGACCTTACCCCTCACGGTCCTTAAGTCTCGGTCGCCCTCGCCTCGCA
GCCTGCCACCCGCGCTCAGCTGCCCGCCTCCTCAGCCAGCCATGCTGGAGCATCTGAGCTCGCTGCCCACGCAGATGGAT
TACAAGGGCCAGAAGCTAGCTGAACAGATGTTTCAGGGAATTATTCTTTTTTCTGCAATAGTTGGATTTATCTACGGGTA
CGTGGCTGAACAGTTCGGGTGGACTGTCTATATAGTTATGGCCGGATTTGCTTTTTCATGTTTGCTGACACTTCCTCCAT
GGCCCATCTATCGCCGGCATCCTCTCAAGTGGTTACCTGTTCAAGAATCAAGCACAGACGACAAGAAACCAGGGGAAAGA
AAAATTAAGAGGCATGCTAAAAATAATTGA

Library Parental gene expression (RPM)
bodymap2_adipose 43 .14 RPM
bodymap2_adrenal 65 .52 RPM
bodymap2_brain 79 .63 RPM
bodymap2_breast 46 .23 RPM
bodymap2_colon 53 .02 RPM
bodymap2_heart 35 .19 RPM
bodymap2_kidney 88 .89 RPM
bodymap2_liver 72 .67 RPM
bodymap2_lung 55 .36 RPM
bodymap2_lymph_node 41 .61 RPM
bodymap2_ovary 59 .05 RPM
bodymap2_prostate 73 .80 RPM
bodymap2_skeletal_muscle 66 .71 RPM
bodymap2_testis 103 .13 RPM
bodymap2_thyroid 70 .05 RPM
bodymap2_white_blood_cells 79 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008426 ortholog_one2one 1 retrogene
retro_amel_1899,
Canis familiaris ENSCAFG00000008927 ortholog_one2one 1 retrogene
retro_cfam_2079,
Equus caballus ENSECAG00000023559 ortholog_one2many 1 retrogene
retro_ecab_86,
Erinaceus europaeus ENSEEUG00000007914 ortholog_one2one 1 retrogene
retro_eeur_25,
Gorilla gorilla ENSGGOG00000028027 ortholog_one2one 1 retrogene
retro_ggor_332,
Microcebus murinus ENSMICG00000014061 ortholog_one2one 1 retrogene
retro_mmur_292,
Myotis lucifugus ENSMLUG00000000744 ortholog_one2one 1 retrogene
retro_mluc_2104,
Macaca mulatta ENSMMUG00000017370 ortholog_one2one 1 retrogene
retro_mmul_549,
Otolemur garnettii ENSOGAG00000004106 ortholog_one2one 3 retrogenes
retro_ogar_2119, retro_ogar_2315, retro_ogar_2788,
Pongo abelii ENSPPYG00000013798 ortholog_one2one 1 retrogene
retro_pabe_380,
Pan troglodytes ENSPTRG00000015011 ortholog_one2one 1 retrogene
retro_ptro_241,
Tarsius syrichta ENSTSYG00000006854 ortholog_one2one 2 retrogenes
retro_tsyr_1359, retro_tsyr_599,
Tursiops truncatus ENSTTRG00000008576 ortholog_one2one 1 retrogene
retro_ttru_806,
Vicugna pacos ENSVPAG00000007380 ortholog_one2one 1 retrogene
retro_vpac_269,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_294 67.77 70.41
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Download FASTA sequences of all ENSG00000114902 retrocopies