Parental gene:

SUMO1, ENSG00000116030

Aliases:SUMO1, DAP1, GMP1, OFC10, PIC1, SENP2, SMT3, SMT3C, SMT3H3, UBL1
Description:small ubiquitin-like modifier 1 [Source:HGNC Symbol;Acc:12502]
Organism:Human (Homo sapiens)
Coordinates:2:203070902..203103331(-)


>ENSG00000116030
ATGTCTGACCAGGAGGCAAAACCTTCAACTGAGGACTTGGGGGATAAGAAGGAAGGTGAATATATTAAACTCAAAGTCAT
TGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAA
GACAGGGTGTTCCAATGAATTCACTCAGGTTTCTCTTTGAGGGTCAGAGAATTGCTGATAATCATACTCCAAAAGAACTG
GGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCATTCAACAGTTTAG

Library Parental gene expression (RPM)
bodymap2_adipose 76 .37 RPM
bodymap2_adrenal 80 .16 RPM
bodymap2_brain 123 .90 RPM
bodymap2_breast 92 .84 RPM
bodymap2_colon 133 .61 RPM
bodymap2_heart 46 .89 RPM
bodymap2_kidney 100 .63 RPM
bodymap2_liver 65 .93 RPM
bodymap2_lung 95 .60 RPM
bodymap2_lymph_node 67 .65 RPM
bodymap2_ovary 88 .10 RPM
bodymap2_prostate 91 .76 RPM
bodymap2_skeletal_muscle 39 .67 RPM
bodymap2_testis 126 .82 RPM
bodymap2_thyroid 123 .23 RPM
bodymap2_white_blood_cells 87 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009859 possible_ortholog 6 retrogenes
retro_btau_112, retro_btau_1512, retro_btau_1705, retro_btau_357, retro_btau_363, retro_btau_499,
Canis familiaris ENSCAFG00000012431 possible_ortholog 8 retrogenes
retro_cfam_1226, retro_cfam_1253, retro_cfam_139, retro_cfam_1815, retro_cfam_1912, retro_cfam_2048, retro_cfam_386, retro_cfam_985,
Callithrix jacchus ENSCJAG00000004961 ortholog_one2one 3 retrogenes
retro_cjac_1686, retro_cjac_1932, retro_cjac_2610,
Cavia porcellus ENSCPOG00000012143 ortholog_one2one 1 retrogene
retro_cpor_1279,
Equus caballus ENSECAG00000024693 ortholog_one2one 4 retrogenes
retro_ecab_199, retro_ecab_365, retro_ecab_570, retro_ecab_935,
Felis catus ENSFCAG00000031005 possible_ortholog 6 retrogenes
retro_fcat_1520, retro_fcat_218, retro_fcat_26, retro_fcat_472, retro_fcat_6, retro_fcat_862,
Homo sapiens ENSG00000184900 within_species_paralog 4 retrogenes
retro_hsap_1675, retro_hsap_1841, retro_hsap_3672, retro_hsap_4103,
Homo sapiens ENSG00000188612 within_species_paralog 2 retrogenes
retro_hsap_4036, retro_hsap_4095,
Myotis lucifugus ENSMLUG00000007504 possible_ortholog 2 retrogenes
retro_mluc_1346, retro_mluc_188,
Mustela putorius furo ENSMPUG00000000335 ortholog_one2one 2 retrogenes
retro_mputfur_257, retro_mputfur_33,
Mus musculus ENSMUSG00000026021 ortholog_one2one 5 retrogenes
retro_mmus_1594, retro_mmus_2129, retro_mmus_2135, retro_mmus_252, retro_mmus_2962,
Otolemur garnettii ENSOGAG00000030345 possible_ortholog 1 retrogene
retro_ogar_215,
Pongo abelii ENSPPYG00000013083 possible_ortholog 3 retrogenes
retro_pabe_11, retro_pabe_1830, retro_pabe_775,
Pan troglodytes ENSPTRG00000012817 possible_ortholog 1 retrogene
retro_ptro_119,
Rattus norvegicus ENSRNOG00000016133 ortholog_one2one 2 retrogenes
retro_rnor_2015, retro_rnor_813,
Sarcophilus harrisii ENSSHAG00000011968 ortholog_one2one 1 retrogene
retro_shar_375,
Ictidomys tridecemlineatus ENSSTOG00000025405 ortholog_one2one 4 retrogenes
retro_itri_1193, retro_itri_1232, retro_itri_216, retro_itri_668,
Tursiops truncatus ENSTTRG00000000642 ortholog_one2one 4 retrogenes
retro_ttru_1646, retro_ttru_1652, retro_ttru_309, retro_ttru_399,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_240 98.02 100.00
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2. retro_hsap_262 82.18 100.00
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3. retro_hsap_897 65.05 100.00
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4. retro_hsap_2007 95.83 94.06
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5. retro_hsap_2489 88.12 100.00
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Download FASTA sequences of all ENSG00000116030 retrocopies