Parental gene:

PDZD11, ENSG00000120509

Aliases:PDZD11, AIPP1, PDZK11, PISP
Description:PDZ domain containing 11 [Source:HGNC Symbol;Acc:28034]
Organism:Human (Homo sapiens)
Coordinates:X:69506444..69510364(-)


>ENSG00000120509
ATGGACAGCCGGATTCCTTATGATGACTACCCGGTGGTTTTCTTGCCTGCCTATGAGAATCCTCCAGCATGGATTCCTCC
TCATGAGAGGGTACACCACCCGGACTACAACAATGAGTTGACCCAGTTTCTGCCCCGAACCATCACACTGAAGAAGCCTC
CTGGAGCTCAGTTGGGATTTAACATCCGAGGAGGAAAGGCCTCCCAGCTAGGCATCTTCATCTCCAAGGTGATTCCTGAC
TCTGATGCACATAGAGCAGGACTGCAGGAAGGGGACCAAGTTCTAGCTGTGAATGATGTGGATTTCCAAGATATTGAGCA
CAGCAAGGCTGTTGAGATCCTGAAGACAGCTCGTGAAATCAGCATGCGTGTGCGCTTCTTTCCCTACAATTATCATCGCC
AAAAAGAGAGGACTGTGCACTAG

Library Parental gene expression (RPM)
bodymap2_adipose 13 .44 RPM
bodymap2_adrenal 16 .19 RPM
bodymap2_brain 26 .49 RPM
bodymap2_breast 16 .77 RPM
bodymap2_colon 22 .93 RPM
bodymap2_heart 13 .51 RPM
bodymap2_kidney 24 .49 RPM
bodymap2_liver 11 .13 RPM
bodymap2_lung 13 .27 RPM
bodymap2_lymph_node 13 .41 RPM
bodymap2_ovary 18 .37 RPM
bodymap2_prostate 26 .36 RPM
bodymap2_skeletal_muscle 7 .55 RPM
bodymap2_testis 16 .53 RPM
bodymap2_thyroid 17 .78 RPM
bodymap2_white_blood_cells 12 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009203 ortholog_one2many 1 retrogene
retro_amel_158,
Bos taurus ENSBTAG00000012860 ortholog_one2one 1 retrogene
retro_btau_594,
Canis familiaris ENSCAFG00000028800 ortholog_one2one 1 retrogene
retro_cfam_1549,
Callithrix jacchus ENSCJAG00000012432 ortholog_one2many 1 retrogene
retro_cjac_138,
Cavia porcellus ENSCPOG00000000210 ortholog_one2one 1 retrogene
retro_cpor_143,
Equus caballus ENSECAG00000010771 ortholog_one2one 1 retrogene
retro_ecab_940,
Echinops telfairi ENSETEG00000008626 ortholog_one2one 3 retrogenes
retro_etel_1026, retro_etel_1863, retro_etel_921,
Felis catus ENSFCAG00000008633 ortholog_one2one 3 retrogenes
retro_fcat_1356, retro_fcat_1410, retro_fcat_263,
Gorilla gorilla ENSGGOG00000006626 ortholog_one2one 1 retrogene
retro_ggor_1108,
Macropus eugenii ENSMEUG00000012040 ortholog_one2one 1 retrogene
retro_meug_1858,
Macaca mulatta ENSMMUG00000013938 ortholog_one2one 1 retrogene
retro_mmul_2265,
Mustela putorius furo ENSMPUG00000004220 ortholog_one2one 1 retrogene
retro_mputfur_823,
Nomascus leucogenys ENSNLEG00000000863 ortholog_one2one 1 retrogene
retro_nleu_1414,
Oryctolagus cuniculus ENSOCUG00000017101 ortholog_one2one 2 retrogenes
retro_ocun_1208, retro_ocun_1945,
Otolemur garnettii ENSOGAG00000016423 ortholog_one2one 1 retrogene
retro_ogar_2975,
Ochotona princeps ENSOPRG00000001811 ortholog_one2one 1 retrogene
retro_opri_374,
Pongo abelii ENSPPYG00000020929 ortholog_one2one 1 retrogene
retro_pabe_1193,
Pan troglodytes ENSPTRG00000021995 ortholog_one2one 1 retrogene
retro_ptro_981,
Rattus norvegicus ENSRNOG00000002838 ortholog_one2one 1 retrogene
retro_rnor_615,
Sarcophilus harrisii ENSSHAG00000005380 ortholog_one2one 1 retrogene
retro_shar_149,
Ictidomys tridecemlineatus ENSSTOG00000027107 ortholog_one2one 2 retrogenes
retro_itri_1264, retro_itri_1702,
Tupaia belangeri ENSTBEG00000002767 ortholog_one2one 2 retrogenes
retro_tbel_3155, retro_tbel_3203,
Tursiops truncatus ENSTTRG00000007864 ortholog_one2one 1 retrogene
retro_ttru_953,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1439 92.14 100.00
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Download FASTA sequences of all ENSG00000120509 retrocopies