Parental gene: | USP12, ENSG00000152484 |
| Aliases: | USP12, UBH1, USP12L1 |
| Description: | ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:20485] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 13:27640292..27746033(-) |
>ENSG00000152484
ATGGAAATCCTAATGACAGTCTCCAAATTCGCCTCCATCTGTACCATGGGCGCCAATGCTTCGGCATTAGAGAAAGAGAT
TGGTCCAGAACAGTTTCCGGTCAATGAGCACTATTTTGGATTAGTCAATTTTGGGAATACCTGCTACTGCAATTCAGTTC
TTCAAGCACTTTATTTTTGTCGTCCATTTCGGGAAAAAGTTCTTGCGTATAAGAGTCAACCTAGGAAAAAGGAGAGCCTT
CTTACATGCTTAGCAGATCTCTTCCATAGCATAGCCACTCAGAAGAAAAAGGTTGGAGTAATACCCCCTAAGAAGTTCAT
CACAAGATTACGGAAAGAAAATGAGCTTTTTGACAACTACATGCAACAAGATGCCCATGAATTCTTAAATTACCTACTAA
ATACAATTGCTGATATTTTACAAGAAGAGAGAAAGCAGGAAAAACAAAATGGTCGTTTACCTAATGGTAATATTGATAAT
GAAAATAATAACAGCACACCAGACCCAACGTGGGTTCATGAGATTTTTCAGGGAACATTAACTAATGAAACCAGATGTCT
TACTTGTGAAACTATAAGCAGCAAAGATGAAGATTTTTTAGACCTTTCTGTTGACGTGGAACAAAATACATCAATTACTC
ACTGCTTAAGGGGTTTCAGCAACACAGAAACTCTGTGCAGTGAATACAAGTATTACTGTGAAGAGTGTCGCAGCAAACAG
GAAGCACACAAACGGATGAAAGTTAAAAAACTGCCCATGATTCTAGCTCTACACCTGAAGAGATTTAAATATATGGATCA
ACTTCATCGATATACAAAACTCTCTTACCGGGTAGTTTTTCCTTTAGAACTTCGTCTGTTTAACACTTCAGGTGATGCCA
CCAATCCAGACAGAATGTACGACCTTGTTGCTGTTGTGGTTCACTGTGGAAGTGGTCCCAATCGAGGCCATTATATTGCA
ATAGTTAAGAGTCATGATTTTTGGTTGTTGTTTGATGACGACATTGTAGAAAAAATAGATGCACAAGCTATTGAAGAATT
CTACGGGTTGACATCAGATATCTCAAAGAACTCTGAGTCTGGTTACATCCTTTTCTATCAGTCTCGGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 55 .16 RPM |
| bodymap2_adrenal | 56 .00 RPM |
| bodymap2_brain | 75 .95 RPM |
| bodymap2_breast | 60 .04 RPM |
| bodymap2_colon | 175 .55 RPM |
| bodymap2_heart | 38 .23 RPM |
| bodymap2_kidney | 68 .93 RPM |
| bodymap2_liver | 25 .35 RPM |
| bodymap2_lung | 91 .79 RPM |
| bodymap2_lymph_node | 46 .82 RPM |
| bodymap2_ovary | 47 .17 RPM |
| bodymap2_prostate | 113 .19 RPM |
| bodymap2_skeletal_muscle | 26 .61 RPM |
| bodymap2_testis | 87 .86 RPM |
| bodymap2_thyroid | 66 .46 RPM |
| bodymap2_white_blood_cells | 58 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019344 | ortholog_one2one | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000006269 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021425 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000323 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030639 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005232 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000005727 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000012960 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2328 | 71.04 | 79.46 | Please wait, loading  |
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| 2. | retro_hsap_3266 | 92.31 | 83.78 | Please wait, loading |
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| 3. | retro_hsap_4726 | 95.69 | 100.00 | Please wait, loading |
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| 4. | retro_hsap_4918 | 94.65 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSG00000152484 retrocopies