Parental gene: | fem1c, ENSGACG00000007406 |
| Aliases: | None |
| Description: | fem-1 homolog c (C.elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3] |
| Organism: | Stickleback (Gasterosteus aculeatus) |
| Coordinates: | groupXIII:7085059..7089222(-) |
>ENSGACG00000007406
ATGGATTTAAAGACTGCCGTATTCAACGCAGCCAGGGACGGGAAGCTCCGCTTGCTCCAAAAACTACTGGAGAACAAAGA
TGGACACGAGGTGACCAAGCTGACGGGCGACAAGACGAACGGCGCCACGCCGCTCCTGATGGCCTCCCGGTACGGCCACC
TGGACCTGGTGGAGTATCTGCTGGAGTGCTGCAGCGCTCCAGTGGAGGTCGGCGGCTCGGTGAACTTTGACGGGGAGACC
ATCGAGGGGGCGCCCCCTCTCTGGGCCGCCTCGGCGGCGGGACACCTGAAGGTGGTCCAGTCCCTGCTGGGCCACGGGGC
GTCCGTGAATAGCACCACCCTCACCAACTCCACCCCTCTGAGGGCGGCCTGCTTCGACGGCCACCTCGACATCGTGAGAT
ACCTGGTGGAGCACAAAGCGGACCTGGAGGTTGCCAACAGACACGGACACACGTGTCTCATGATCTCCTGCTACAAGGGA
CACAAGGAGATCGCGCAGTACCTGCTGGAGAGAGGCGCGGATGTCAACCGGAAAAGTGTCAAAGGCAACACGGCGCTTCA
CGACTGCGCGGAGTCGGGCAGTCTTGAGATCATGCGGATGCTGCTGCAGTTTGGAGCGTCCATGGAGCAGGACGGCTACG
GCATGACCCCGCTGCTGTCCGCCAGCGTCACGGGCCACACAAACATCGTAGACGACCTTACGACGCACCAGCAGACAAGC
CACAAAGCGCGCATAGACGCACTGGAGCTCCTGGGAGCCACATTTGTCGACAAGAAGAGAGATCTGCTCGGAGCGTTAAA
ATACTGGAAGAGAGCCATGGACCTCCGGTACATGGACAGCAACCACGTCGTCCATAAAGCAGAAGCCAAGCAGCTGATCA
TGGCATACGACTACGCCAGAGAGGTAACAAACGGAGAAGAGCTGGACGGGCTGATATCCGACCCGGATGAGATGCGCATG
CAGGCTCTGCTCATCCGGGAGAGAATCCTTGGCCCACAGCACCCGGACACGTCGTACTACATCCGTTACCGAGGGGCCGT
CTACGCCGACTCGGGGAACTTTGAGCGCTGTATCAATTTGTGGAAGTATGCCTTGGACATGCAGCAAAGCAACCTGGACC
CCCTCAGCCCCATGACTGCCTCCAGCCTGCTGTCATTCGCCGAGCTCTTCTCCTTCATGCTGCAGGACCGAGCCAAAGGG
CTCCTGGGGACGTCTGTGTCATTCGAGGACTTGATGGGGATCCTTTCCAAAAGCGTGCTGGAGATTGAGCGCGCAGTTAC
ACAAACTGGGCCGATGCCTCCGGACCCTGCGCAGCTCAGCAAGGCCCTGTCAATCATCCTGCACCTCATTTGTCTTTTGG
AGAAGGTGCCCTGTACTGCAGAGCAGGACCACTTCAAAAAGGAAACCATCTATAAATTCCTGAAGCTGCAGCCCTGCGGT
AAAAACGGCTACAGTCCACTACACCTGGCGGTCGACCGCAACACTACCTGTGTGGGCCGCTATCCCGTCTGCAAGTTCCC
CTCCCTCACCGTGGCCTCCATCCTCCTCGAGTGTGGGGCCGATGTGAACAGCCGTGATGAAGATGACAACAGCCCCCTTC
ACATAGCCGCATCCAACGGTCACCCCGACATCATGAACCTGCTGATATCGTGCGGGACTCACTTCGACTGCACCAACGCC
TTCCAACAAACGGCCTACGATATCCTGCACGAGAAGGAGCTGTCCAGGAACGTAATCCAGCCCATAAACCACACCACGCT
GCAGTGCCTCGCCGCCAGGGCCATCGTCAAGCACAGCCTGGCTTACCGGGGGAACATCCCTGAGAAACTAGAGGCCTTTG
TTTTGCTCCACAGATAA
ATGGATTTAAAGACTGCCGTATTCAACGCAGCCAGGGACGGGAAGCTCCGCTTGCTCCAAAAACTACTGGAGAACAAAGA
TGGACACGAGGTGACCAAGCTGACGGGCGACAAGACGAACGGCGCCACGCCGCTCCTGATGGCCTCCCGGTACGGCCACC
TGGACCTGGTGGAGTATCTGCTGGAGTGCTGCAGCGCTCCAGTGGAGGTCGGCGGCTCGGTGAACTTTGACGGGGAGACC
ATCGAGGGGGCGCCCCCTCTCTGGGCCGCCTCGGCGGCGGGACACCTGAAGGTGGTCCAGTCCCTGCTGGGCCACGGGGC
GTCCGTGAATAGCACCACCCTCACCAACTCCACCCCTCTGAGGGCGGCCTGCTTCGACGGCCACCTCGACATCGTGAGAT
ACCTGGTGGAGCACAAAGCGGACCTGGAGGTTGCCAACAGACACGGACACACGTGTCTCATGATCTCCTGCTACAAGGGA
CACAAGGAGATCGCGCAGTACCTGCTGGAGAGAGGCGCGGATGTCAACCGGAAAAGTGTCAAAGGCAACACGGCGCTTCA
CGACTGCGCGGAGTCGGGCAGTCTTGAGATCATGCGGATGCTGCTGCAGTTTGGAGCGTCCATGGAGCAGGACGGCTACG
GCATGACCCCGCTGCTGTCCGCCAGCGTCACGGGCCACACAAACATCGTAGACGACCTTACGACGCACCAGCAGACAAGC
CACAAAGCGCGCATAGACGCACTGGAGCTCCTGGGAGCCACATTTGTCGACAAGAAGAGAGATCTGCTCGGAGCGTTAAA
ATACTGGAAGAGAGCCATGGACCTCCGGTACATGGACAGCAACCACGTCGTCCATAAAGCAGAAGCCAAGCAGCTGATCA
TGGCATACGACTACGCCAGAGAGGTAACAAACGGAGAAGAGCTGGACGGGCTGATATCCGACCCGGATGAGATGCGCATG
CAGGCTCTGCTCATCCGGGAGAGAATCCTTGGCCCACAGCACCCGGACACGTCGTACTACATCCGTTACCGAGGGGCCGT
CTACGCCGACTCGGGGAACTTTGAGCGCTGTATCAATTTGTGGAAGTATGCCTTGGACATGCAGCAAAGCAACCTGGACC
CCCTCAGCCCCATGACTGCCTCCAGCCTGCTGTCATTCGCCGAGCTCTTCTCCTTCATGCTGCAGGACCGAGCCAAAGGG
CTCCTGGGGACGTCTGTGTCATTCGAGGACTTGATGGGGATCCTTTCCAAAAGCGTGCTGGAGATTGAGCGCGCAGTTAC
ACAAACTGGGCCGATGCCTCCGGACCCTGCGCAGCTCAGCAAGGCCCTGTCAATCATCCTGCACCTCATTTGTCTTTTGG
AGAAGGTGCCCTGTACTGCAGAGCAGGACCACTTCAAAAAGGAAACCATCTATAAATTCCTGAAGCTGCAGCCCTGCGGT
AAAAACGGCTACAGTCCACTACACCTGGCGGTCGACCGCAACACTACCTGTGTGGGCCGCTATCCCGTCTGCAAGTTCCC
CTCCCTCACCGTGGCCTCCATCCTCCTCGAGTGTGGGGCCGATGTGAACAGCCGTGATGAAGATGACAACAGCCCCCTTC
ACATAGCCGCATCCAACGGTCACCCCGACATCATGAACCTGCTGATATCGTGCGGGACTCACTTCGACTGCACCAACGCC
TTCCAACAAACGGCCTACGATATCCTGCACGAGAAGGAGCTGTCCAGGAACGTAATCCAGCCCATAAACCACACCACGCT
GCAGTGCCTCGCCGCCAGGGCCATCGTCAAGCACAGCCTGGCTTACCGGGGGAACATCCCTGAGAAACTAGAGGCCTTTG
TTTTGCTCCACAGATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gadus morhua | ENSGMOG00000005806 | ortholog_one2one | 1 retrogene | |
| Oreochromis niloticus | ENSONIG00000015041 | ortholog_one2one | 1 retrogene | |
| Oryzias latipes | ENSORLG00000004946 | ortholog_one2one | 1 retrogene | |
| Tetraodon nigroviridis | ENSTNIG00000003195 | ortholog_one2one | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000012022 | ortholog_one2one | 1 retrogene | |
| Xiphophorus maculatus | ENSXMAG00000015297 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_gacu_12 | 70.23 | 99.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGACG00000007406 retrocopies