Parental gene:

BTF3, ENSGGOG00000000166

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:17:24260315..24267540(-)


>ENSGGOG00000000166
AAGTGGCCTTGTGTCACTTCCGGCCTCCCTTTAGCTGCCATCTTGCGTCCCCGCGTGTGTGCGCCTAATCTCAGGTGGTC
CACCCGAGACCCCTTGAGCACCAACCCTAGTCCCCCGCGCGGCCCCTTATTCGCTCCGACAAGGATGAAAGAAACAATCA
TGAACCAGGAAAAACTCGCCAAACTGCAGGCACAAGTGCGCATTGGTGGGAAAGGAACTGCTCGCAGAAAGAAGAAGGTG
GTTCATAGAACAGCCACAGCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAAGTTAGGGGTAAACAATATCTCTGGTAT
TGAAGAGGTGAATATGTTTACAAACCAAGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCATCTCTGGCAGCGA
ACACTTTCACCATTACAGGCCATGCTGAGACGAAGCAGCTGACAGAAATGCTACCCAGCATCTTAAACCAGCTTGGTGCG
GATAGTCTGACTAGTTTAAGGAGACTGGCCGAAGCTCTGCCCAAACAATCTGTGGATGGAAAAGCACCACTTGCTACTGG
AGAGGATGATGATGATGAAGTTCCAGATCTTGTGGAGAATTTTGATGAGGCTTCCAAGAATGAGGCAAACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 60 .76 RPM
SRP007412_cerebellum 67 .41 RPM
SRP007412_heart 37 .71 RPM
SRP007412_kidney 133 .91 RPM
SRP007412_liver 95 .94 RPM
SRP007412_testis 119 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010012 possible_ortholog 5 retrogenes
retro_btau_1161, retro_btau_1344, retro_btau_1361, retro_btau_459, retro_btau_551,
Callithrix jacchus ENSCJAG00000016600 possible_ortholog 4 retrogenes
retro_cjac_1454, retro_cjac_1673, retro_cjac_2640, retro_cjac_281,
Ciona savignyi ENSCSAVG00000009653 ortholog_one2many 1 retrogene
retro_csav_25,
Equus caballus ENSECAG00000021629 possible_ortholog 1 retrogene
retro_ecab_200,
Echinops telfairi ENSETEG00000017341 ortholog_one2one 5 retrogenes
retro_etel_1216, retro_etel_1394, retro_etel_1997, retro_etel_405, retro_etel_960,
Microcebus murinus ENSMICG00000017182 possible_ortholog 3 retrogenes
retro_mmur_1219, retro_mmur_1301, retro_mmur_651,
Monodelphis domestica ENSMODG00000001762 possible_ortholog 3 retrogenes
retro_mdom_189, retro_mdom_454, retro_mdom_931,
Nomascus leucogenys ENSNLEG00000004718 possible_ortholog 9 retrogenes
retro_nleu_1081, retro_nleu_1199, retro_nleu_1284, retro_nleu_1446, retro_nleu_1797, retro_nleu_2526, retro_nleu_451, retro_nleu_496, retro_nleu_734,
Oryctolagus cuniculus ENSOCUG00000024914 ortholog_one2one 6 retrogenes
retro_ocun_1186, retro_ocun_1299, retro_ocun_1364, retro_ocun_446, retro_ocun_857, retro_ocun_916,
Pongo abelii ENSPPYG00000029576 ortholog_one2one 14 retrogenes
retro_pabe_1154, retro_pabe_1477, retro_pabe_180, retro_pabe_1885, retro_pabe_1956, retro_pabe_2207, retro_pabe_2458, retro_pabe_2918, retro_pabe_2919, retro_pabe_2932, retro_pabe_3329, retro_pabe_3484, retro_pabe_558, retro_pabe_649,
Rattus norvegicus ENSRNOG00000016912 ortholog_one2many 9 retrogenes
retro_rnor_187, retro_rnor_194, retro_rnor_2121, retro_rnor_2520, retro_rnor_2990, retro_rnor_2991, retro_rnor_2999, retro_rnor_836, retro_rnor_953,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_81 79.62 73.81
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2. retro_ggor_548 55.12 95.24
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3. retro_ggor_946 74.60 61.17
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4. retro_ggor_1082 75.86 95.71
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5. retro_ggor_1682 85.71 91.43
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6. retro_ggor_1961 86.63 95.71
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7. retro_ggor_2054 85.37 96.19
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8. retro_ggor_2399 81.44 91.43
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9. retro_ggor_2647 81.90 53.81
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10. retro_ggor_2667 81.53 74.29
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Download FASTA sequences of all ENSGGOG00000000166 retrocopies