Parental gene:

CLIC4, ENSGGOG00000005586

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:1:25639601..25685689(+)


>ENSGGOG00000005586
ATGTTGAGTATCATCACTTTGACCTTGTTTTTAATGTTTAATTCTGTTTTCCAGGCTGGCAGTGATGGTGAAAGCATAGG
AAACTGCCCCTTTTCCCAGAGGCTCTTCATGATTCTTTGGCTCAAAGGAGTTGTATTTAGTGTGACGACTGTTGACCTGA
AAAGGAAGCCAGCAGACCTGCAGAACTTGGCTCCCGGGACCCACCCACCATTTATAACTTTCAACAGTGAAGTCAAAACG
GATGTAAATAAGATTGAGGAATTTCTTGAAGAAGTCTTATGCCCTCCCAAGTACTTAAAGCTTTCACCAAAACACCCAGA
ATCAAATACTGCTGGAATGGACATCTTTGCCAAATTCTCTGCATATATCAAGAATTCAAGGCCAGAGGCTAATGAAGCAC
TGGAGAGGGGTCTCCTGAAAACCCTGCAGAAACTGGATGAATATCTGAATTCTCCTCTCCCTGATGAAATTGATGAAAAT
AGTATGGAGGACATAAAGTTTTCTACACGTAAATTTCTGGATGGCAATGAAATGACATTAGCTGATTGCAACCTGCTGCC
CAAACTGCATATTGTCAAGGTGGTGGCCAAAAAATATCGCAACTTTGATATTCCAAAAGAAATGACTGGCATCTGGAGAT
ACCTAACTAATGCATACAGTAGGGACGAGTTCACCAATACCTGTCCCAGTGATAAGGAGGTTGAAATAGCATATAGTGAT
GTAGCCAAAAGACTCACCAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 27 .43 RPM
SRP007412_cerebellum 19 .78 RPM
SRP007412_heart 27 .27 RPM
SRP007412_kidney 213 .07 RPM
SRP007412_liver 63 .52 RPM
SRP007412_testis 75 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007591 ortholog_one2one 10 retrogenes
retro_chof_1284, retro_chof_1401, retro_chof_1446, retro_chof_1654, retro_chof_2177, retro_chof_2673, retro_chof_784, retro_chof_789, retro_chof_808, retro_chof_947,
Callithrix jacchus ENSCJAG00000020833 ortholog_one2one 2 retrogenes
retro_cjac_1713, retro_cjac_461,
Cavia porcellus ENSCPOG00000004010 ortholog_one2one 1 retrogene
retro_cpor_1490,
Homo sapiens ENSG00000169504 ortholog_one2one 2 retrogenes
retro_hsap_4143, retro_hsap_4678,
Gorilla gorilla ENSGGOG00000011331 within_species_paralog 1 retrogene
retro_ggor_2153,
Macropus eugenii ENSMEUG00000008789 ortholog_one2one 1 retrogene
retro_meug_780,
Macaca mulatta ENSMMUG00000002416 ortholog_one2one 2 retrogenes
retro_mmul_1183, retro_mmul_2488,
Mus musculus ENSMUSG00000037242 ortholog_one2one 2 retrogenes
retro_mmus_2259, retro_mmus_945,
Nomascus leucogenys ENSNLEG00000008997 ortholog_one2one 3 retrogenes
retro_nleu_1457, retro_nleu_1785, retro_nleu_2168,
Otolemur garnettii ENSOGAG00000014620 ortholog_one2one 1 retrogene
retro_ogar_2672,
Pongo abelii ENSPPYG00000001715 ortholog_one2one 3 retrogenes
retro_pabe_219, retro_pabe_3466, retro_pabe_3632,
Pan troglodytes ENSPTRG00000000350 ortholog_one2one 3 retrogenes
retro_ptro_2816, retro_ptro_3107, retro_ptro_396,
Pteropus vampyrus ENSPVAG00000005838 ortholog_one2one 1 retrogene
retro_pvam_812,
Ictidomys tridecemlineatus ENSSTOG00000002184 ortholog_one2many 1 retrogene
retro_itri_52,
Tarsius syrichta ENSTSYG00000008978 ortholog_one2one 1 retrogene
retro_tsyr_252,
Vicugna pacos ENSVPAG00000007699 ortholog_one2one 1 retrogene
retro_vpac_475,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1579 89.13 93.12
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2. retro_ggor_2783 82.14 66.80
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Download FASTA sequences of all ENSGGOG00000005586 retrocopies