Parental gene: | VDAC2, ENSGGOG00000005861 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 10:87884469..87908533(+) |
>ENSGGOG00000005861
ATGGCGACCCACGGACAGACTTTCGCGCGTCCAATGTGTATTCCTCCATCATATGCTGACCTTGGCAAAGCTGCCAGAGA
TATTTTCAACAAAGGATTTGGTTTTGGGTTAGTGAAACTGGATGTGAAAACAAAGTCTTGCAGTGGCGTGGAATTTTCAA
CGTCCGGTTCATCTAATACAGACACTGGTAAAGTTACTGGGACCTTGGAGACCAAATACAAGTGGTGTGAATATGGTCTG
ACTTTCACAGAAAAGTGGAACACTGATAACACTCTGGGAACAGAAATCGCAATTGAAGACCAGATTTGTCAAGGTTTGAA
ACTGACATTTGATACTACCTTCTCACCAAACACAGGAAAGAAAAGTGGTAAAATCAAGTCTTCTTACAAGAGGGAGTGTA
TAAACCTTGGTTGTGATGTTGACTTTGATTTTGCTGGACCTGCAATCCATGGTTCAGCTGTCTTTGGTTATGAGGGCTGG
CTTGCTGGGTACCAGATGACCTTTGACAGTGCCAAATCAAAGCTGACAAGGAATAACTTTGCAGTGGGCTACAGGACTGG
GGACTTCCAGCTACACACTAATGTCAATGATGGGACAGAATTTGGAGGATCAATTTATCAGAAAGTTTGTGAAGATCTTG
ACACTTCAGTAAACCTTGCTTGGACATCAGGTACCAACTGCACTCGTTTTGGCATTGCAGCTAAATATCAGTTGGATCCC
ACTGCTTCCATTTCTGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAA
GCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGG
CTTAA
ATGGCGACCCACGGACAGACTTTCGCGCGTCCAATGTGTATTCCTCCATCATATGCTGACCTTGGCAAAGCTGCCAGAGA
TATTTTCAACAAAGGATTTGGTTTTGGGTTAGTGAAACTGGATGTGAAAACAAAGTCTTGCAGTGGCGTGGAATTTTCAA
CGTCCGGTTCATCTAATACAGACACTGGTAAAGTTACTGGGACCTTGGAGACCAAATACAAGTGGTGTGAATATGGTCTG
ACTTTCACAGAAAAGTGGAACACTGATAACACTCTGGGAACAGAAATCGCAATTGAAGACCAGATTTGTCAAGGTTTGAA
ACTGACATTTGATACTACCTTCTCACCAAACACAGGAAAGAAAAGTGGTAAAATCAAGTCTTCTTACAAGAGGGAGTGTA
TAAACCTTGGTTGTGATGTTGACTTTGATTTTGCTGGACCTGCAATCCATGGTTCAGCTGTCTTTGGTTATGAGGGCTGG
CTTGCTGGGTACCAGATGACCTTTGACAGTGCCAAATCAAAGCTGACAAGGAATAACTTTGCAGTGGGCTACAGGACTGG
GGACTTCCAGCTACACACTAATGTCAATGATGGGACAGAATTTGGAGGATCAATTTATCAGAAAGTTTGTGAAGATCTTG
ACACTTCAGTAAACCTTGCTTGGACATCAGGTACCAACTGCACTCGTTTTGGCATTGCAGCTAAATATCAGTTGGATCCC
ACTGCTTCCATTTCTGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAA
GCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGG
CTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 85 .65 RPM |
| SRP007412_cerebellum | 67 .33 RPM |
| SRP007412_heart | 102 .03 RPM |
| SRP007412_kidney | 115 .31 RPM |
| SRP007412_liver | 44 .24 RPM |
| SRP007412_testis | 119 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000012975 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000015398 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001145 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000026943 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000165637 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001932 | within_species_paralog | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010880 | within_species_paralog | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000012995 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007500 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000003268 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021771 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000030039 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000013505 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000012048 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001946 | possible_ortholog | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000004764 | possible_ortholog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000008068 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_425 | 72.73 | 52.04 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1677 | 56.25 | 96.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1949 | 59.66 | 97.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2934 | 69.12 | 96.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_3036 | 69.12 | 96.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000005861 retrocopies