Parental gene:

VDAC2, ENSCAFG00000015398

Aliases:None
Description:voltage-dependent anion channel 2 [Source:HGNC Symbol;Acc:12672]
Organism:Dog (Canis familiaris)
Coordinates:4:25449422..25461842(+)


>ENSCAFG00000015398
ATGGCGACCTACGGGCAGAGCTGCGCGCGGCCAATGTGTGTTCCTCCATCCTATGCTGACCTTGGCAAAGCTGCCAGAGA
TATTTTCAACAAAGGATTTGGTTTTGGGCTGGTGAAACTGGATGTGAAAACAAAGTCATGCAGTGGTGTGGAATTCTCAA
CGTCTGGTTCATCTAATACAGACACTGGTAAAGTTACTGGAACCTTGGAGACCAAATATAAATGGTGTGAGTATGGTCTG
ACTTTCACAGAAAAGTGGAACACCGATAACACTCTGGGAACAGAAATCGCAATTGAAGACCAGATCTGTCAAGGTTTGAA
ACTGACATTTGATACCACCTTTTCACCAAACACGGGAAAGAAAAGTGGTAAAATCAAGTCTTCTTACAAGAGGGAGTGTA
TAAACCTTGGTTGTGATGTTGACTTTGATTTTGCTGGACCTGCAATCCATGGTTCAGCCGTCTTTGGTTATGAGGGCTGG
CTTGCTGGCTACCAGATGACTTTTGATAGTGCCAAATCAAAGCTGACAAGAAATAACTTTGCAGTGGGCTACAGGACTGG
GGACTTCCAACTACACACTAATGTCAATGACGGGACAGAATTTGGAGGATCAATTTATCAGAAAGTATGTGAAGATCTTG
ACACTTCAGTAAACCTTGCTTGGACATCAGGTACCAACTGCACTCGCTTTGGCATTGCAGCCAAATATCAGTTGGATCCC
ACTGCTTCCATTTCTGCAAAAGTCAACAACTCTAGTTTAATTGGAGTGGGCTACACTCAGACTCTGAGGCCTGGTGTCAA
GCTTACACTGTCTGCCCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAACTTGGGCTTGCCCTGGAGTTGGAGG
CTTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 141 .62 RPM
SRP017611_brain 143 .07 RPM
SRP017611_kidney 294 .86 RPM
SRP017611_liver 56 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012975 ortholog_one2one 2 retrogenes
retro_btau_1252, retro_btau_1389,
Canis familiaris ENSCAFG00000000985 within_species_paralog 1 retrogene
retro_cfam_1728,
Canis familiaris ENSCAFG00000005502 within_species_paralog 5 retrogenes
retro_cfam_1513, retro_cfam_2146, retro_cfam_258, retro_cfam_665, retro_cfam_713,
Callithrix jacchus ENSCJAG00000001145 ortholog_one2one 1 retrogene
retro_cjac_2385,
Felis catus ENSFCAG00000026943 ortholog_one2one 3 retrogenes
retro_fcat_1385, retro_fcat_804, retro_fcat_815,
Homo sapiens ENSG00000165637 ortholog_one2one 1 retrogene
retro_hsap_2114,
Gorilla gorilla ENSGGOG00000005861 ortholog_one2one 5 retrogenes
retro_ggor_1677, retro_ggor_1949, retro_ggor_2934, retro_ggor_3036, retro_ggor_425,
Macropus eugenii ENSMEUG00000012995 possible_ortholog 1 retrogene
retro_meug_30,
Myotis lucifugus ENSMLUG00000007500 ortholog_one2one 2 retrogenes
retro_mluc_1710, retro_mluc_2252,
Mustela putorius furo ENSMPUG00000003268 ortholog_one2one 1 retrogene
retro_mputfur_354,
Mus musculus ENSMUSG00000021771 ortholog_one2one 1 retrogene
retro_mmus_2667,
Otolemur garnettii ENSOGAG00000030039 ortholog_one2one 1 retrogene
retro_ogar_2116,
Rattus norvegicus ENSRNOG00000013505 ortholog_one2many 1 retrogene
retro_rnor_2652,
Sarcophilus harrisii ENSSHAG00000012048 ortholog_one2one 1 retrogene
retro_shar_325,
Tupaia belangeri ENSTBEG00000001946 possible_ortholog 4 retrogenes
retro_tbel_1504, retro_tbel_1541, retro_tbel_1885, retro_tbel_4597,
Tarsius syrichta ENSTSYG00000004764 possible_ortholog 1 retrogene
retro_tsyr_14,
Vicugna pacos ENSVPAG00000008068 possible_ortholog 1 retrogene
retro_vpac_156,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_376 94.90 53.40
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Download FASTA sequences of all ENSCAFG00000015398 retrocopies