Parental gene: | RPLP2, ENSGGOG00000010789 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 11:734661..737337(+) |
>ENSGGOG00000010789
ATGCGCTACGTCGCCTCCTATCTGCTGGCTGCCCTAGGGGGCAATTCCTCCCCCAGCGCCAAGGACATCAAGAAGATCTT
GGACAGCGTGGGTATCGAGGCGGACGACGACCGGCTCAACAAGGTTATCAGTGAGCTGAATGGAAAAAACATTGAAGACG
TCATTGCCCAGGGTATTGGCAAGCTTGCCAGTGTACCTGCCGGTGGGGCTGTAGCCGTCTCTGCTGCCCCAGGCTCTGCA
GCCCCTGCTGCTGGTTCTGCCCCTGCTGCAGCAGAGGAGAAGAAAGATGAGAAGAAGGAGGAGTCTGAAGAGTCAGACGA
TGACATGGGATTTGGCCTTTTTGATTAA
ATGCGCTACGTCGCCTCCTATCTGCTGGCTGCCCTAGGGGGCAATTCCTCCCCCAGCGCCAAGGACATCAAGAAGATCTT
GGACAGCGTGGGTATCGAGGCGGACGACGACCGGCTCAACAAGGTTATCAGTGAGCTGAATGGAAAAAACATTGAAGACG
TCATTGCCCAGGGTATTGGCAAGCTTGCCAGTGTACCTGCCGGTGGGGCTGTAGCCGTCTCTGCTGCCCCAGGCTCTGCA
GCCCCTGCTGCTGGTTCTGCCCCTGCTGCAGCAGAGGAGAAGAAAGATGAGAAGAAGGAGGAGTCTGAAGAGTCAGACGA
TGACATGGGATTTGGCCTTTTTGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 60 .47 RPM |
| SRP007412_cerebellum | 63 .71 RPM |
| SRP007412_heart | 84 .71 RPM |
| SRP007412_kidney | 157 .05 RPM |
| SRP007412_liver | 176 .05 RPM |
| SRP007412_testis | 74 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001777 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000009523 | possible_ortholog | 1 retrogene | |
| Ciona intestinalis | ENSCING00000000626 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000016458 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000008417 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000177600 | ortholog_one2one | 5 retrogenes | |
| Mus musculus | ENSMUSG00000025508 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000026860 | ortholog_one2one | 5 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016296 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000002885 | ortholog_one2one | 6 retrogenes | |
| Pan troglodytes | ENSPTRG00000003137 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000002116 | ortholog_one2many | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000001056 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012842 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_672 | 93.91 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_784 | 60.19 | 92.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2238 | 81.74 | 99.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2298 | 87.93 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_2323 | 72.55 | 87.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000010789 retrocopies