Parental gene:

ATP5A1, ENSGGOG00000016560

Aliases:None
Description:ATP synthase subunit alpha [Source:UniProtKB/TrEMBL;Acc:G3RK98]
Organism:Gorilla (Gorilla gorilla)
Coordinates:18:43638212..43652471(-)


>ENSGGOG00000016560
ATGCTGTCCGTGCGCGTTGCTGCGGCCGTGGTCCGCGCCCTTCCTCGGCGGGCCGGACTGGTCTCCAGAAATGCTTTGGG
TTCATCTTTCATTGCTGCAAGGAACCTCCATGCCTCTAACACTCATCTTCAGAAGACTGGGACTGCTGAGATGTCCTCTA
TTCTTGAAGAGCGTATTCTTGGAGCTGATACCTCTGTTGACCTTGAAGAAACTGGGCGTGTCTTAAGTATTGGTGATGGT
ATTGCCCGCGTACATGGGCTGAGGAATGTTCAAGCAGAAGAAATGGTAGAGTTTTCTTCAGGCTTAAAGGGTATGTCCTT
GAACTTGGAACCTGACAATGTTGGTGTTGTCGTGTTTGGAAATGATAAACTAATTAAGGAAGGAGATATAGTGAAGAGGA
CAGGAGCCATTGTGGACGTTCCAGTTGGTGAGGAGCTGTTGGGTCGTGTAGTTGATGCCCTTGGTAATACTATTGATGGA
AAGGGTCCAATTGGTTCCAAGATGCGTAGGCGAGTTGGTCTGAAAGCCCCTGGTATCATTCCTCGAATTTCAGTGCGGGA
ACCAATGCAGACTGGCATTAAGGCTGTGGATAGCTTGGTGCCAATTGGTCGTGGTCAGCGTGAGCTGATTATTGGTGACC
GACAGACTGGGAAAACCTCAATTGCTATTGACACAATCATTAACCAGAAACGTTTCAATGATGGATCTGATGAAAAGAAG
AAGCTGTACTGTATTTATGTTGCTATCGGTCAAAAGAGATCCACTGTTGCCCAGTTGGTGAAGAGACTTACAGATGCAGA
TGCCATGAAGTACACCATTGTGGTGTCGGCTACGGCCTCGGATGCTGCCCCACTTCAGTACCTGGCTCCTTACTCTGGCT
GTTCCATGGGAGAGTATTTTAGAGACAATGGCAAACATGCTTTGATCATCTATGACGACTTATCCAAACAGGCTGTTGCT
TACCGTCAGATGTCTCTGTTGCTCCGCCGACCCCCTGGTCGTGAGGCTTATCCTGGTGATGTGTTCTACCTACACTCCCG
GTTGCTGGAGAGAGCAGCCAAAATGAACGATGCTTTTGGTGGTGGCTCCTTGACTGCTTTGCCAGTCATAGAAACACAGG
CTGGTGATGTGTCTGCTTACATTCCAACAAATGTCATTTCCATCACTGACGGACAGATCTTCTTGGAAACAGAATTGTTC
TACAAAGGTATCCGCCCTGCAATTAACGTTGGTCTGTCTGTATCTCGTGTCGGATCCGCTGCCCAAACCAGGGCTATGAA
GCAGGTGGCAGGTACCATGAAGCTGGAATTGGCTCAGTATCGTGAGGTTGCTGCTTTTGCCCAGTTCGGTTCTGACCTCG
ATGCTGCCACTCAACAACTTTTGAGTCGTGGCGTGCGTCTAACTGAGTTGCTGAAGCAAGGACAGTATTCTCCCATGGCT
ATTGAAGAACAAGTGGCTGTTATCTATGCGGGTGTAAGGGGATATCTTGATAAACTGGAGCCCAGCAAGATTACAAAGTT
TGAGAATGCTTTCTTGTCTCATGTCGTCAGCCAGCACCAAGCCTTGTTGGGCACTATCAGGGCTGATGGAAAGATCTCAG
AACAATCAGATGCAAAGCTGAAAGAGATTGTAACAAACTTCTTGGCTGGATTTGAAGCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 335 .39 RPM
SRP007412_cerebellum 227 .13 RPM
SRP007412_heart 404 .88 RPM
SRP007412_kidney 537 .85 RPM
SRP007412_liver 145 .87 RPM
SRP007412_testis 296 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002507 ortholog_one2one 2 retrogenes
retro_btau_1380, retro_btau_1426,
Canis familiaris ENSCAFG00000017648 possible_ortholog 2 retrogenes
retro_cfam_1483, retro_cfam_516,
Dasypus novemcinctus ENSDNOG00000006331 ortholog_one2one 2 retrogenes
retro_dnov_1740, retro_dnov_2525,
Equus caballus ENSECAG00000021561 ortholog_one2one 1 retrogene
retro_ecab_788,
Homo sapiens ENSG00000152234 ortholog_one2one 1 retrogene
retro_hsap_1702,
Meleagris gallopavo ENSMGAG00000009963 possible_ortholog 1 retrogene
retro_mgal_14,
Microcebus murinus ENSMICG00000017500 ortholog_one2one 1 retrogene
retro_mmur_1210,
Myotis lucifugus ENSMLUG00000009856 ortholog_one2one 1 retrogene
retro_mluc_1198,
Macaca mulatta ENSMMUG00000003570 ortholog_one2one 1 retrogene
retro_mmul_1208,
Mustela putorius furo ENSMPUG00000000923 possible_ortholog 1 retrogene
retro_mputfur_601,
Nomascus leucogenys ENSNLEG00000010973 ortholog_one2one 1 retrogene
retro_nleu_1334,
Pongo abelii ENSPPYG00000009130 ortholog_one2one 1 retrogene
retro_pabe_1363,
Pan troglodytes ENSPTRG00000009991 ortholog_one2one 1 retrogene
retro_ptro_1151,
Sarcophilus harrisii ENSSHAG00000017177 possible_ortholog 1 retrogene
retro_shar_109,
Tarsius syrichta ENSTSYG00000007804 ortholog_one2one 1 retrogene
retro_tsyr_1186,
Tursiops truncatus ENSTTRG00000005118 ortholog_one2one 1 retrogene
retro_ttru_159,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1275 87.47 77.40
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Download FASTA sequences of all ENSGGOG00000016560 retrocopies