Parental gene:

ENSSHAG00000017177

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL841191.1:2548598..2558807(-)


>ENSSHAG00000017177
ATGCTGTCCGTACGCGTCGCCGCGGCCTTGGCCCGCGCCCTCCCCCGCCAAGCCGGGCTGGTCTCCAGAAATGCCTTGGG
AGCAGCCTTTGTTGCAACCAGGAACCTCCATTCCTCTAACAACCGCCTTCAGAAGTCTGGCACTGCTGAAGTGTCCTCTA
TTCTGGAAGAGCGTATTTTGGGAGCTGATACCTCTGTTGACCTTGAAGAAACTGGGAGAGTCCTTTCTATTGGTGATGGT
ATTGCTCGTGTACATGGATTAAGAAATGTTCAGGCAGAGGAAATGGTGGAATTTTCTTCAGGTCTTAAGGGTATGTCCCT
GAACTTGGAACCTGACAATGTTGGTGTTGTCGTGTTTGGTAATGATAAATTGATTAAAGAAGGAGATATTGTAAAGAGAA
CAGGAGCCATTGTGGATGTTCCTGTTGGTGAGGAACTTTTGGGCCGTGTCGTAGATGCTCTGGGCAACGCCATTGATGGA
AAGGGTCCAATTGGTTCCAAAACTCGTCGACGAGTTGGTCTGAAGGCCCCTGGAATCATTCCAAGAATTTCTGTGCGTGA
GCCCATGCAGACTGGCATTAAGGCTGTGGATAGCTTGGTACCAATTGGCCGTGGACAGCGTGAACTGATTATTGGTGACA
GACAGACTGGCAAAACATCAATTGCTATTGATACAATCATTAATCAGAAACGTTTTAATGATGGAACTGATGAAAAGAAG
AAGCTATACTGTATTTATGTTGCTATTGGTCAGAAGAGATCCACTGTTGCTCAGCTGGTGAAGAGACTTACAGATGCAGA
TGCCATGAAATACACCATCGTGGTTTCAGCCACTGCATCTGATGCTGCTCCACTTCAGTACTTGGCTCCTTATTCTGGAT
GCTCTATGGGAGAATATTTCCGAGATAATGGCAAACATGCTCTAATTATCTATGATGACTTGTCCAAACAGGCTGTTGCC
TACCGTCAGATGTCTCTGTTGCTCCGTCGTCCTCCTGGTCGGGAGGCTTATCCTGGTGATGTGTTCTACCTGCACTCCCG
TCTGCTGGAGAGAGCAGCTAAAATGAATGACACTTTTGGAGGTGGTTCTTTGACTGCACTTCCAGTGATTGAAACACAGG
CTGGTGATGTGTCAGCATACATTCCAACAAATGTCATCTCCATCACTGATGGACAGATTTTCTTGGAAACAGAGTTGTTC
TACAAAGGTATCCGCCCTGCCATTAATGTTGGTTTGTCTGTGTCCCGTGTCGGATCAGCTGCTCAAACCAGAGCAATGAA
ACAGGTGGCAGGTACCATGAAGCTGGAGTTGGCTCAGTATCGTGAGGTGGCAGCTTTTGCTCAGTTTGGTTCTGATCTAG
ATGCTGCTACTCAACAACTGCTGAGTCGTGGTGTGCGTCTGACTGAGTTGCTGAAACAAGGACAGTATTCTCCCATGGCA
ATTGAAGAGCAGGTGGCAGTCATTTATGCTGGTGTCCGAGGGTATCTGGACAAACTGGAGCCCAGCAAAATCACTAAGTT
TGAGAGTGCTTTCTTGGCTCATGTCATCAGCCAACACCAGTCCCTCTTGAATAATATCAGAACTGATGGAAAGATCTCAG
AACAGTCGGATGCAAAACTGAAGGAAATTGTCACAAACTTCTTGGCTGGATTTGAAGCTTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002507 possible_ortholog 2 retrogenes
retro_btau_1380, retro_btau_1426,
Canis familiaris ENSCAFG00000017648 possible_ortholog 2 retrogenes
retro_cfam_1483, retro_cfam_516,
Dasypus novemcinctus ENSDNOG00000006331 possible_ortholog 2 retrogenes
retro_dnov_1740, retro_dnov_2525,
Equus caballus ENSECAG00000021561 possible_ortholog 1 retrogene
retro_ecab_788,
Homo sapiens ENSG00000152234 possible_ortholog 1 retrogene
retro_hsap_1702,
Gorilla gorilla ENSGGOG00000016560 possible_ortholog 1 retrogene
retro_ggor_1275,
Macropus eugenii ENSMEUG00000009770 ortholog_one2one 1 retrogene
retro_meug_151,
Meleagris gallopavo ENSMGAG00000009963 possible_ortholog 1 retrogene
retro_mgal_14,
Microcebus murinus ENSMICG00000017500 possible_ortholog 1 retrogene
retro_mmur_1210,
Myotis lucifugus ENSMLUG00000009856 possible_ortholog 1 retrogene
retro_mluc_1198,
Macaca mulatta ENSMMUG00000003570 possible_ortholog 1 retrogene
retro_mmul_1208,
Mustela putorius furo ENSMPUG00000000923 possible_ortholog 1 retrogene
retro_mputfur_601,
Nomascus leucogenys ENSNLEG00000010973 possible_ortholog 1 retrogene
retro_nleu_1334,
Oryctolagus cuniculus ENSOCUG00000003967 possible_ortholog 1 retrogene
retro_ocun_1235,
Otolemur garnettii ENSOGAG00000026684 possible_ortholog 1 retrogene
retro_ogar_2623,
Pongo abelii ENSPPYG00000009130 possible_ortholog 1 retrogene
retro_pabe_1363,
Pan troglodytes ENSPTRG00000009991 possible_ortholog 1 retrogene
retro_ptro_1151,
Tarsius syrichta ENSTSYG00000007804 possible_ortholog 1 retrogene
retro_tsyr_1186,
Tursiops truncatus ENSTTRG00000005118 possible_ortholog 1 retrogene
retro_ttru_159,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_109 89.12 88.07
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Download FASTA sequences of all ENSSHAG00000017177 retrocopies