Parental gene:

RSL1D1, ENSLAFG00000013664

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_53:3241253..3254001(+)


>ENSLAFG00000013664
CTCGGGAGAAGTTACCCTGGTGGTTCCGCACGCTCCTCTGCACGAGGTGAGGGCGGTATGGAGGCCTCGGCGTCGACCCC
AGCCTCAGCCTCGCCTCCGGCGACCCCGGCCGCAGCGGACCCGCGGCTGGAGCTGAGCAAAACACAGGTTAAAAAAGCAG
TGAAAGCTCTATTGGCACATTCACAGTCCAGAAAAAATGCTAATGAAGTGCTTCTGAATGAGAATGAAACTTTATTTTTG
ATGGTGGTGTTATGGAAAATTCCAAAGAAGGAGCTGAGAGTCAGATTGTCCTTGCCTTATGCTATTCGATCAGATTTAGC
AGAAGTCTGTTTATTTACCAAGGATGAACCCAATTTAACTCCTGAAAAAACAGAACATTTCTATAGGAATCTGTTGAACA
AGCATAAAATTAAGACCATTTCTCAGATTATCCCCCTCCGAACTTTAAAAAAGGAATATAAACCCTATGAAGCCAAGCTC
CGCCTCTTGGGTAGTTTTGATTTCTTCCTTACTGATGCAAGAATCAGGAGGCTTTTACCCTCAATTATAGGGAAACATTT
CTACCTCAGAAAGAAAGTCCCAGTATGTGTAAACCTCCTGGCCAAGGATTTATCAAAAGAAATCAATGACTGTATTGGTG
GAACTGTCATGAACATCTCTAAAAATGGTTCTTGCAGCACCATCCGCGTTGGTCACACTGGAATGATGGTCCAGCACATT
GTTGAAAACATCGTTGCTGTCACAAAAGGGCTTTCAGAAAAATTGCCAGAGAAGTGGAAGAGTGTGAAACTCTTATACCT
GAAAACTGAGAAATCAGTTGCCCTTCCAATCTTCTCTTCATTCGTCAGTGCTTTTTATGAAGGAGAAGGAGGACCCCTTC
CTGGCCAGAAGAAAAAATTTAAACAGAAATTTTATAGACATCTGTTAATTCAAACAGAAGTCTTGGTGTTGCAGCAGGCT
GCAAAGACTAAAAAGACTAAATCAGCCCAAAATGAAGATAAAGCGGCAGCTGAAGTCAGTGGTGCTCCAGCGAAGAGCCC
CAGAGAGGAAGAGGAGATCCACAGAGTAAAAGCCCAACTTAAAGTGGGAGACGAATCTGAGGAAGAAATTCCACTGCTAG
TACCAATGGAAAAAACATCTGCTAAGAAAAAAAATGTAGAGATGCAAAAAGGTGCCACGGTAAAGAAGTCTCAGAAAAAG
AGTCCTGGTCCCAATACACCTGTTGGGAAGAAGAGAAAGGCCTCCCCAGCTCTGGAGACCCCTAAAGCTTCAGAGCCAGG
AACCCCAGGTAAGAAGAAGAAAAAAGACCTGAGACAGACTCCAAAAAAGCCCGGGCCCAAGTTCTTTGCCACTCCTAGTA
AATCTACCCGAAAAACGCCCCAGACCCCCAAACAACAGCCAAAAAAACCCAAAGTGCCCCAGTCGACCTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000018865 ortholog_one2one 2 retrogenes
retro_cfam_1937, retro_cfam_691,
Choloepus hoffmanni ENSCHOG00000010827 ortholog_one2one 2 retrogenes
retro_chof_1617, retro_chof_852,
Callithrix jacchus ENSCJAG00000008375 ortholog_one2many 1 retrogene
retro_cjac_2154,
Cavia porcellus ENSCPOG00000010630 ortholog_one2one 3 retrogenes
retro_cpor_1262, retro_cpor_276, retro_cpor_822,
Myotis lucifugus ENSMLUG00000000784 ortholog_one2one 1 retrogene
retro_mluc_1309,
Monodelphis domestica ENSMODG00000029494 ortholog_one2many 2 retrogenes
retro_mdom_1240, retro_mdom_573,
Otolemur garnettii ENSOGAG00000015151 ortholog_one2one 1 retrogene
retro_ogar_2604,
Rattus norvegicus ENSRNOG00000048608 ortholog_one2many 1 retrogene
retro_rnor_2771,
Sarcophilus harrisii ENSSHAG00000016705 ortholog_one2one 1 retrogene
retro_shar_836,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_364 73.50 72.06
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Download FASTA sequences of all ENSLAFG00000013664 retrocopies